Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S55.g02008.02.t

Possible name(s)

ADRM1

Gene model

Phmamm.CG.MTP2014.S55.g02008

Location

S55 [21,457 / 24,174]

Sequences

Amino acid sequence

Length: 358

>Phmamm.CG.MTP2014.S55.g02008.02.p
MSLFGSNARGGTKNIVEFRAGKMHLKGTTVTPDKRKGQVYVYQTEDSLIHFCWKDRTSGN
VEDDLIIFPDDCELKRVAQCTTGRVYLLRFKLTNRKMFFWMQEPKSDKDEEFCKKVNDAL
NNPPQPGQGQPSAADLGGLEALAQGANLQDLFSNMDQQQLLQLMAAGGGLGNILGQAGGT
RTRSRNSGATTTRTPTTTTTTPQRTTSTNATTTSSTTPSTAQSTVQLSQLQDILSQMGTQ
KPKETVNLADAITPEAMIPILVDPKIQEQLKPFLPQGETLSSTEEELRSTVHSPHFRQAM
GSFSSALASGQLGSLLAQFGLPEAAQAAADKGDVEAFAKAMQDSAKKPASKDEDMSVD

Nucleotide sequence

Length: 1,159

>Phmamm.CG.MTP2014.S55.g02008.02.t
AAAGTTTTATAAAGTCCCACCATGTCGTTGTTTGGAAGTAATGCTCGCGGCGGTACGAAG
AACATTGTGGAATTTAGGGCAGGAAAAATGCATTTGAAAGGGACGACTGTGACACCGGAC
AAGCGCAAGGGCCAAGTTTATGTTTATCAAACTGAAGATTCGTTAATTCACTTCTGCTGG
AAAGATCGCACCAGTGGCAATGTTGAGGATGATTTAATCATTTTTCCAGATGATTGCGAA
CTAAAACGAGTCGCCCAATGCACAACTGGAAGAGTCTATCTTCTTCGATTCAAGTTGACC
AACAGAAAGATGTTTTTCTGGATGCAGGAGCCAAAAAGTGACAAAGATGAGGAGTTTTGC
AAAAAAGTGAACGATGCTTTGAACAATCCTCCACAACCAGGTCAGGGTCAACCATCGGCT
GCAGATCTTGGTGGACTTGAAGCTCTGGCACAAGGAGCAAATTTACAGGATTTATTCAGT
AATATGGATCAGCAACAATTGCTTCAACTTATGGCAGCAGGGGGAGGATTGGGAAATATT
TTGGGACAAGCTGGTGGAACACGAACTCGCAGTAGGAACAGCGGAGCAACTACAACCCGT
ACACCGACAACAACAACCACTACTCCACAAAGGACCACTTCAACCAATGCTACCACTACA
TCAAGTACAACGCCTTCCACTGCCCAATCTACAGTCCAGTTAAGTCAACTTCAGGATATT
TTGTCTCAGATGGGAACACAAAAACCCAAAGAAACAGTGAACCTGGCTGATGCCATAACA
CCTGAAGCAATGATTCCAATTCTGGTTGACCCAAAAATCCAGGAGCAGCTAAAGCCTTTC
CTGCCCCAGGGAGAGACTTTAAGTTCTACCGAGGAAGAGCTGCGATCCACCGTGCACTCT
CCCCATTTCAGACAGGCAATGGGTTCGTTCAGTTCTGCTTTGGCTTCAGGACAACTTGGG
TCGCTGCTAGCACAATTTGGTTTGCCAGAAGCTGCACAGGCTGCAGCTGACAAAGGAGAT
GTTGAGGCCTTTGCAAAAGCAATGCAAGACAGTGCCAAGAAGCCTGCGTCCAAGGATGAA
GATATGTCTGTGGATTAATTCCTTATTCACCACTACTACATCCCTATACCTTTTGTCAAG
TTAAACAAATAAATTCAAC

InterProScan

PANTHER	Rpn13/ADRM1 (IPR006773) - T[11-346] 4.8E-109
Gene3D	Rpn13/ADRM1_sf (IPR038633) - T[14-122] 2.2E-46
Pfam	Rpn13/ADRM1 (IPR006773) - T[21-103] 1.8E-32
Gene3D	RPN13_C_sf (IPR038108) - T[226-347] 2.1E-38
Pfam	RPN13_C (IPR032368) - T[231-341] 1.6E-32

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ADRM1_HUMAN	65.823 %	230	1.61E-72