- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S558.g10053.02.t
Possible name(s)
DMRT1; DMRTA1; DMRTA2
Gene model
Location
S558 [46,604 / 50,318]
Amino acid sequence
Length: 623
>Phmamm.CG.MTP2014.S558.g10053.02.p
MTSTGRPVDLAEATAGHMHNVSYSSPMMSAAAAVAAHQATSARSEYNSLAQAVSNPAAAA
LLLRAADKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCPKCTLIAERQRVMAAQVAL
RRQQAQEENESRELQLLYGATQGMAGMGGQRMSQVSMSSCSPKTSPNSEFGMQKQGYDED
LAPIDSKRPRLDIQRSSVSPQMPNANSTFASPLVGGEQSPRDLRQEATHGRSPQGSDEES
QNQSEGLSLKRSPTHPAMDEINQNETRRSPLVKMPSPIRGSPTPHSPDSSLFAGGNAENI
VNAERYALPQNMDAIGKLKSNLVMLCRIFPKRSAAYLESALRNCDGDVVKTIEKVFNSEE
HSASHDGLAKVRMQARKRSYNAAYVNSLPPPNSNASLPALPVSRLTEISPNGERADSPAS
VGCSSASPPTPNATHHQAQPAHAMNHFHLPGLIAASTSQAFKSAFHPLTSDAKGPSGTNF
TGAFNLSHDATSSPAHNPANQAPRNRLPGQLPLTGFNSLSPFAAAAYNAHAQHPSARNMG
AFGVSPYVAASSFMPSLAAAAAAGFSGHPGLAKDYSFSGFMRGMSAIAYNKDKLHASGGM
NGLHSVYRFDSSASDASSCSSDK
Nucleotide sequence
Length: 1,872
>Phmamm.CG.MTP2014.S558.g10053.02.t
ATGACCAGCACCGGACGACCAGTGGACTTAGCAGAAGCAACGGCTGGACACATGCACAAC
GTATCCTATAGTTCACCAATGATGAGCGCAGCAGCAGCGGTAGCCGCACACCAAGCCACA
TCGGCACGAAGTGAATACAACAGCCTCGCCCAGGCTGTGTCAAACCCTGCCGCGGCGGCT
CTGCTTCTCCGGGCCGCGGACAAGTACCCGAGAACGCCGAAGTGTGCAAGGTGCCGAAAC
CACGGAGTTGTGAGTGCGCTTAAAGGACACAAACGTTATTGCCGGTGGAAAGACTGTCTT
TGCCCCAAATGCACCCTGATCGCTGAAAGACAACGCGTCATGGCCGCCCAGGTCGCCCTG
CGCAGACAACAAGCCCAAGAAGAGAACGAATCACGGGAACTTCAATTGCTTTACGGCGCA
ACACAAGGAATGGCAGGAATGGGAGGGCAACGCATGTCACAAGTTTCAATGAGCAGTTGC
TCACCCAAAACATCACCAAACTCCGAATTCGGAATGCAAAAACAAGGATATGATGAAGAT
TTGGCCCCTATCGATTCAAAGCGACCACGACTCGACATACAACGTTCCAGCGTCAGTCCC
CAGATGCCAAACGCAAACAGCACTTTTGCGTCACCACTTGTCGGCGGAGAGCAGTCGCCA
CGTGACCTGCGCCAGGAGGCTACGCACGGACGCTCGCCACAAGGTTCGGACGAAGAGAGC
CAAAATCAGAGCGAAGGCTTGAGCCTAAAGCGATCCCCAACACACCCGGCTATGGATGAA
ATCAATCAGAACGAGACCAGGCGATCACCCTTGGTAAAGATGCCGTCGCCTATTAGAGGA
AGTCCTACACCTCACAGCCCCGACAGCTCCTTGTTTGCTGGAGGAAATGCAGAGAACATT
GTCAATGCCGAAAGATACGCGTTGCCACAGAACATGGACGCCATAGGAAAGCTAAAGTCA
AACCTGGTAATGCTGTGCCGTATATTCCCGAAAAGAAGCGCCGCCTATTTGGAAAGTGCC
CTTAGAAACTGTGACGGAGACGTCGTCAAAACAATTGAAAAGGTATTCAACAGTGAAGAG
CACTCTGCGAGTCATGACGGTCTTGCAAAGGTCAGAATGCAGGCCCGGAAACGATCATAC
AACGCGGCTTATGTGAATTCTCTACCTCCACCCAACAGCAACGCGAGTCTACCTGCTTTG
CCTGTCAGCCGCCTCACAGAAATAAGTCCAAACGGTGAAAGAGCTGACAGTCCAGCTAGC
GTTGGATGCAGTAGCGCCTCGCCACCGACCCCAAACGCAACACACCATCAAGCACAACCC
GCACACGCGATGAATCACTTCCATCTGCCAGGACTAATTGCCGCCTCTACATCACAAGCC
TTCAAATCGGCCTTCCATCCTCTTACCAGCGACGCAAAGGGACCAAGCGGCACCAACTTC
ACCGGGGCCTTTAACTTGTCGCATGACGCCACAAGTTCGCCAGCTCATAACCCTGCCAAT
CAGGCTCCACGTAACAGGTTACCGGGTCAGCTGCCTTTGACCGGATTCAACTCGCTGTCT
CCCTTTGCTGCTGCAGCCTACAATGCCCACGCTCAGCATCCGTCTGCTCGCAACATGGGC
GCTTTTGGTGTTTCGCCTTACGTGGCAGCGTCTAGTTTCATGCCGAGTTTGGCGGCAGCC
GCTGCGGCCGGATTCAGCGGCCATCCCGGCCTTGCCAAAGACTACTCTTTCAGTGGGTTT
ATGCGAGGCATGAGCGCTATAGCGTACAACAAAGACAAACTGCATGCTTCTGGCGGCATG
AACGGCTTACACTCAGTGTACAGATTTGACTCGTCGGCTTCTGACGCATCTTCTTGCTCA
AGCGACAAATAA
| PANTHER |
DMRT/dsx/mab-3 (IPR026607) - T[31-374] 2.1E-65 |
| Gene3D |
DM_DNA-bd_sf (IPR036407) - T[68-117] 2.2E-23 |
| SUPERFAMILY |
DM_DNA-bd_sf (IPR036407) - T[70-117] 1.44E-17 |
| SMART |
DM_DNA-bd (IPR001275) - T[71-124] 5.8E-28 |
| Pfam |
DM_DNA-bd (IPR001275) - T[71-117] 1.3E-22 |
| ProSitePatterns |
DM_DNA-bd (IPR001275) - T[75-104] . |
| ProSiteProfiles |
DM_DNA-bd (IPR001275) - T[75-122] 14.371 |
| Pfam |
DMA (IPR005173) - T[320-355] 6.1E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMTA2_HUMAN | 91.358 % | 169 | 1.16E-45 |
| DMRTA_HUMAN | 88.406 % | 139 | 2.0E-35 |
| DMRT1_HUMAN | 78.125 % | 116 | 2.41E-28 |