- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Boschl.CG.Botznik201...' >
- EST 'AHC0AAA231YL06_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S555.g10027.02.t
Possible name(s)
BBS4; IFT88; TTC8
Gene model
Location
S555 [40,898 / 47,506]
Amino acid sequence
Length: 552
>Phmamm.CG.MTP2014.S555.g10027.02.p
MSTHSETTSSGAGEVKAESESEHYQPPTLSVAAGPKRKIKARKAAKLPSIERRNWLIHSH
FIRKEFDGCKSLIQEQLVETNGQCEYAIYIQALMLRSDGEIQQSLELFQACHQINPKNPD
NMKQIAKNLILLGKHKSAIECYNHATDLGERDWEICHCLGVCYQFLKQLDQAEQCFLEAL
SKGKHTVTYSVLAKLYLEQQETKKAIDILQKGVDFAPENTDLLTSLGLLHLRNESFHRAF
ELLGQALTYDPENYKAILAAGSLMQKHGDFDVALTKYRVAAQRVPESSSLWNNIAMCFFG
KKKNVAAISCLKRANYLSPFDWRILYNLSLLHLTMQQYASAFQFASTAIGLKSDHGPLYM
LLAVGLANLGQDDNAEQAYLKAMELNSNDPHTLINYCVFLHNRGNSQKAANILGNFHKLS
DDKSVSVEKELFEISKRLSAVLNVGEKIVVEKEKVEKHRKKKATKKTESVSSLAEMEQQN
HIEEQAAPSGNLKPKKLAPLGTLSSVSSPSTLPPLRSPMGPLNPSDLLSQMPAVPEHDPE
RRSTKHKQPVAE
Nucleotide sequence
Length: 1,659
>Phmamm.CG.MTP2014.S555.g10027.02.t
ATGTCTACGCATTCAGAAACTACTTCTAGTGGTGCTGGTGAAGTGAAAGCAGAAAGTGAA
AGTGAGCATTACCAACCGCCAACTTTATCGGTAGCAGCTGGCCCAAAGCGTAAAATTAAA
GCTAGAAAAGCTGCCAAACTTCCAAGCATAGAAAGAAGAAATTGGTTGATTCATTCACAT
TTTATCCGCAAAGAGTTTGATGGCTGTAAGAGCCTTATTCAAGAACAATTAGTGGAAACC
AATGGACAGTGTGAATATGCCATATATATTCAGGCATTAATGTTGAGAAGTGATGGTGAG
ATTCAACAATCTCTTGAGTTGTTTCAAGCTTGTCATCAAATCAATCCTAAGAATCCAGAT
AATATGAAACAGATTGCCAAAAATTTAATTTTACTTGGAAAACACAAAAGTGCTATTGAG
TGCTACAACCATGCCACAGACTTGGGTGAAAGAGATTGGGAAATTTGCCATTGTCTTGGT
GTATGTTACCAGTTCTTAAAGCAACTTGATCAGGCTGAGCAATGCTTTTTGGAAGCATTA
TCCAAAGGAAAACATACAGTAACATACAGCGTACTTGCAAAACTGTATTTAGAACAACAG
GAAACCAAAAAGGCAATTGACATTCTGCAAAAAGGTGTCGATTTTGCTCCCGAGAATACT
GATCTTCTCACATCTCTTGGTCTTTTGCATTTGCGAAATGAGAGCTTCCATCGTGCTTTT
GAGCTTCTTGGGCAAGCATTGACCTATGACCCTGAAAACTACAAGGCTATACTGGCAGCT
GGTTCTCTCATGCAAAAACATGGAGATTTTGATGTAGCGCTCACTAAGTACAGAGTAGCA
GCACAAAGAGTACCTGAAAGCTCTTCATTGTGGAACAACATTGCAATGTGTTTCTTTGGA
AAAAAGAAAAATGTTGCAGCCATTAGCTGTTTAAAACGAGCAAACTACCTTTCACCATTT
GATTGGAGAATTTTGTATAACCTCAGTCTACTCCATCTCACCATGCAACAATATGCAAGT
GCTTTTCAATTTGCATCCACTGCCATTGGCCTAAAGTCAGATCATGGCCCTCTGTACATG
TTGTTAGCAGTGGGACTTGCAAACCTGGGACAAGATGATAATGCGGAACAGGCATACCTA
AAAGCAATGGAACTCAATTCGAATGACCCCCACACCCTAATTAACTACTGTGTGTTTCTT
CACAATCGGGGCAATTCACAAAAGGCTGCAAATATTTTGGGAAATTTCCATAAACTTAGT
GATGACAAATCTGTGTCAGTTGAAAAAGAGCTTTTTGAAATCAGTAAACGCTTGTCGGCT
GTCCTTAATGTGGGTGAAAAAATTGTTGTGGAGAAAGAGAAAGTTGAAAAGCACAGAAAA
AAGAAAGCAACAAAGAAGACTGAAAGTGTATCATCTCTTGCTGAAATGGAACAACAAAAT
CACATAGAGGAGCAAGCTGCACCATCAGGCAATTTGAAGCCAAAAAAACTTGCTCCATTA
GGAACACTTTCATCAGTATCAAGCCCTTCTACTTTACCCCCATTGCGATCCCCGATGGGC
CCTTTAAACCCCAGTGACCTTCTATCGCAAATGCCCGCAGTTCCCGAACATGATCCAGAA
CGAAGAAGCACCAAGCACAAGCAACCTGTGGCTGAATAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[70-184] 1.5E-19 - T[185-443] 1.0E-41 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[85-423] 43.35 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[85-118] 7.169 - T[119-152] 6.284 - T[186-219] 9.706 - T[220-253] 10.089 - T[254-287] 7.375 - T[288-321] 6.166 - T[322-355] 6.254 - T[356-389] 7.493 |
| SMART |
TPR_repeat (IPR019734) - T[85-118] 10.0 - T[119-152] 59.0 - T[153-186] 0.062 - T[187-219] 23.0 - T[220-253] 1.0 - T[288-321] 12.0 - T[322-355] 16.0 - T[356-389] 0.33 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[102-299] 5.69E-27 - T[279-412] 4.25E-22 |
| Pfam |
TPR_repeat (IPR019734) - T[156-181] 0.048 - T[358-389] 0.013 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BBS4_HUMAN | 53.986 % | 474 | 2.5E-163 |