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  1. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S547.g09942.01.t

Possible name(s)

RGR; RRH; TAAR1

Gene model

Phmamm.CG.MTP2014.S547.g09942

Location

S547 [52,347 / 55,908]

Sequences

Amino acid sequence

Length: 280

>Phmamm.CG.MTP2014.S547.g09942.01.p
MELDNTTVRGAYGVLLLLIVIAALLGYAVVALAIWNRKDLQQKNIWLTSLATSDVMMLIH
MLVIVMSTIQSTWPFGKFGCQVNAWMGLASGFISIASITWIAIDRYYQQCQPDMCGKNYN
FFMILVWSLGAVAASLPAFGFGAYEVAHEHTAGCLVDLNQHDSKMQAYIMLVAAVWFVYP
LTKIFRYYNKLSIESKQQQMLSKIVPALFLVCYCPYAMYASLKVTVGVGVLPVWMVAVIY
LLPKIIPALNPYIYMQSDPELLSACQEVIHWRRQEAVKQQ

Nucleotide sequence

Length: 843

>Phmamm.CG.MTP2014.S547.g09942.01.t
ATGGAATTGGACAACACCACTGTAAGAGGCGCGTATGGAGTTCTCTTGTTGCTGATTGTG
ATCGCTGCATTGCTTGGTTACGCGGTTGTGGCTCTTGCCATATGGAACAGAAAAGACCTG
CAGCAGAAAAACATTTGGCTGACGTCATTAGCCACCTCTGACGTTATGATGCTGATCCAC
ATGCTCGTCATTGTGATGTCAACAATTCAAAGCACCTGGCCTTTCGGCAAGTTCGGCTGT
CAGGTGAACGCATGGATGGGCCTGGCATCTGGCTTTATCAGCATTGCAAGCATCACATGG
ATCGCTATTGACCGATACTACCAGCAATGTCAACCCGACATGTGTGGAAAGAATTACAAC
TTCTTCATGATCTTGGTGTGGTCGCTTGGTGCTGTTGCTGCAAGTTTGCCCGCATTTGGT
TTCGGGGCTTACGAGGTTGCACACGAGCACACCGCGGGGTGCCTTGTGGATCTTAACCAG
CATGACAGCAAGATGCAAGCTTACATTATGTTGGTGGCTGCAGTGTGGTTTGTTTATCCT
CTCACTAAAATCTTCCGCTACTACAACAAGTTGAGTATTGAAAGCAAGCAGCAACAGATG
CTTTCCAAGATCGTGCCAGCCCTGTTTCTGGTTTGCTACTGTCCGTATGCGATGTACGCA
AGTTTGAAGGTCACAGTTGGGGTCGGTGTTCTACCAGTGTGGATGGTGGCGGTTATTTAC
CTTCTGCCCAAGATTATCCCAGCATTGAACCCGTACATTTACATGCAATCTGATCCTGAA
CTTCTATCAGCTTGCCAAGAAGTTATCCACTGGAGGCGCCAAGAGGCCGTCAAGCAACAA
TAG

InterProScan

PRINTS
GPCR_Rhodpsn (IPR000276) - T[11-35] 2.1E-15 - T[43-64] 2.1E-15 - T[87-109] 2.1E-15 - T[169-192] 2.1E-15 - T[198-222] 2.1E-15 - T[236-262] 2.1E-15
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[26-254] 16.038
Pfam
GPCR_Rhodpsn (IPR000276) - T[29-196] 4.8E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value