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  1. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S524.g09751.01.t

Possible name(s)

RABGEF1; ZFAND5; ZFAND6

Gene model

Phmamm.CG.MTP2014.S524.g09751

Location

S524 [46,146 / 51,241]

Sequences

Amino acid sequence

Length: 189

>Phmamm.CG.MTP2014.S524.g09751.01.p
MEGPSQSSQATLCRNGCGFYGSPKTDGMCSICYKDVVQKKNNSGRKSPGITHVNSKPVEM
SPSSVTSRSEVASAMASLATSDVPVTTISPIKESSASSLPIAIPSATNPNTSLTSPSPKN
SSFDEAGTSLDDSQASPSKPKKNRCASCRKRLGLTGGSYIYVKLFSTVNLVNPDLFGRKN
VSRLFKDPY

Nucleotide sequence

Length: 570

>Phmamm.CG.MTP2014.S524.g09751.01.t
ATGGAAGGTCCGAGTCAGTCGAGTCAAGCAACGCTCTGCAGAAATGGGTGTGGATTTTAT
GGAAGCCCCAAAACTGATGGGATGTGTTCGATCTGTTATAAAGATGTTGTGCAGAAGAAA
AACAACTCAGGGCGAAAATCTCCAGGCATCACTCATGTGAACAGCAAGCCGGTGGAGATG
TCACCTAGCTCGGTTACCAGTCGGAGTGAAGTAGCAAGTGCAATGGCATCCCTAGCCACT
AGTGACGTTCCCGTCACCACTATTAGCCCTATTAAGGAAAGCAGTGCCTCGAGTTTGCCG
ATAGCCATTCCATCAGCTACGAATCCCAATACATCCCTCACCTCTCCATCACCTAAGAAC
TCCAGTTTTGATGAAGCAGGCACATCCCTCGACGATAGTCAAGCCTCCCCATCGAAACCG
AAGAAGAATCGATGTGCTTCTTGTAGAAAGAGGCTCGGCCTTACCGGTGGGTCATATATA
TATGTTAAGCTTTTTAGTACTGTAAACTTGGTTAATCCAGACCTGTTTGGACGAAAAAAT
GTGTCGCGATTATTCAAAGATCCATATTAA

InterProScan

ProSiteProfiles
Znf_A20 (IPR002653) - T[7-41] 10.095
SMART
Znf_A20 (IPR002653) - T[10-34] 1.7E-8
Pfam
Znf_A20 (IPR002653) - T[12-34] 1.2E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZFAN6_HUMAN 40.506 % 87 1.97E-21
ZFAN5_HUMAN 37.58 % 88.6 4.38E-22