- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Boleac.CG.SB_v3.S125...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S522.g09724.01.t
Possible name(s)
TDRD1; TDRD15; TDRD7
Gene model
Location
S522 [21,627 / 24,132]
Amino acid sequence
Length: 834
>Phmamm.CG.MTP2014.S522.g09724.01.p
MNHWNPQSEDFSDRNFNPDVGGSSSDNVSFGLYVRNIPTDLQETGLKNLFSAYGNVRFVK
LLPQKYPQGGVSGFVHYGTLREAEKAIKCLNNFSIGKYCIKVQHAKPKQEKQAEVSKSDY
LSLLKKLEIGPLIEADLNSLIQKVDSGCFRNPLLNKSKDKQQNDDIEIVDDPDSPPKLIS
IDNVATGEDFSLSKQTNLGSDTSEFNTALIPTIQEPNAVAIEMPSRTARYKCGDTVNLTV
VDVNPNKGTFVCQFAAEEEQLKLKSLHVHLNQYQKHGNKESVNEINDGVLCATVYSADGE
WYRGRIKGAVKERKVSVQFIDYGNIETVEVDQLCQLNPDFCKMPAFSINCKLWCVGKWSD
KVTEFALQFLKQCELHVVVRVHEVIDEVIFGDVQANGISLVEHLQQKDLVSCNTNSLSPN
SIPRSENMLHIQIPNEENSFDVKSPKEQSVPKELPNLVQESLPKEDFKVVVTHVNSPSSF
YFQVVQQNQTELNKLQQWMSDEILTLKLQSLPTIGTFYAANCPNENRWIRVMVLNCLGQL
AVKVLSVDFGNIEVISVNTLRQLPLQFRHLPIQAFEAMLSGGQNREGIWSKEALGYFKRI
EGCTFMATVKDVVSEKYEVALKTATNKDVREQLLSFELKVVSTNAFCCGIPLIKPPLDAD
VEIIITEVEQGGLFYCQIADGNIALFENITKVLKQHYEESSGSNENLELKEDTMYAVKSD
NGQWYRAMVEQANENGQLVVRYSDFGNIAQVTRAQIYQLPEKFHTFPIQAIKCKLQDAKP
TDANKWHGGFVKVCRALVKTPISARFMANCKDHYSVKVPKMLNKLITDNIAEYC
Nucleotide sequence
Length: 2,505
>Phmamm.CG.MTP2014.S522.g09724.01.t
ATGAACCACTGGAATCCACAAAGTGAAGACTTCAGCGACCGTAACTTCAATCCCGATGTT
GGTGGTAGCAGCAGTGATAATGTAAGTTTCGGTTTGTATGTCAGGAATATACCAACTGAC
CTTCAAGAAACTGGATTAAAGAACCTTTTTAGTGCATACGGAAATGTTCGTTTTGTCAAA
TTGCTCCCTCAAAAATATCCACAAGGTGGAGTGTCTGGGTTTGTACATTATGGCACACTC
AGAGAGGCTGAGAAGGCAATAAAGTGTTTAAACAACTTTAGCATTGGCAAATACTGTATA
AAGGTTCAACATGCAAAGCCCAAACAGGAAAAACAAGCAGAAGTAAGCAAAAGTGATTAT
CTTTCGTTATTGAAAAAGTTGGAGATTGGACCCTTGATCGAAGCTGACTTGAACAGTTTA
ATTCAAAAAGTTGACAGTGGCTGCTTTAGGAATCCTTTGTTAAATAAATCCAAAGACAAA
CAGCAAAATGATGACATTGAGATTGTTGATGACCCAGACTCACCCCCAAAGCTAATTTCT
ATTGATAATGTTGCCACTGGTGAAGATTTCAGCCTTTCAAAACAAACCAATCTTGGCAGT
GATACTTCTGAATTTAACACAGCTCTTATCCCAACCATTCAAGAACCTAATGCAGTTGCT
ATTGAAATGCCATCTCGTACTGCAAGATACAAATGTGGCGATACAGTAAATCTTACTGTT
GTTGATGTGAATCCAAATAAAGGGACTTTTGTCTGTCAGTTTGCTGCAGAAGAAGAGCAG
CTAAAACTTAAATCTTTGCATGTACATCTTAATCAATACCAAAAGCATGGGAACAAGGAA
TCTGTAAATGAAATAAATGATGGTGTATTGTGTGCTACAGTGTACTCAGCAGATGGTGAA
TGGTATAGAGGCAGAATCAAGGGAGCAGTTAAAGAAAGAAAAGTTTCTGTTCAATTTATA
GATTATGGAAATATTGAAACAGTAGAAGTGGACCAGTTATGTCAACTGAACCCAGACTTT
TGCAAGATGCCTGCATTCTCTATCAATTGTAAACTTTGGTGTGTTGGAAAATGGTCTGAC
AAAGTGACAGAATTTGCGTTACAGTTTCTCAAGCAGTGTGAGCTACATGTTGTTGTGCGT
GTGCATGAGGTCATTGATGAAGTCATATTTGGAGATGTTCAGGCTAATGGAATTTCTTTA
GTTGAACATCTTCAGCAAAAGGATCTTGTGTCATGTAACACCAACTCTCTTTCTCCAAAT
TCAATACCAAGATCAGAAAACATGTTACACATCCAGATTCCAAATGAGGAGAATAGTTTC
GATGTCAAATCTCCAAAGGAGCAGAGTGTACCAAAAGAATTGCCAAATTTGGTCCAGGAA
TCATTGCCAAAAGAAGATTTTAAGGTTGTTGTAACACATGTGAATTCGCCCAGTTCATTC
TATTTTCAGGTTGTACAGCAAAACCAAACTGAGCTTAATAAGTTACAACAGTGGATGTCT
GATGAAATCTTAACATTAAAGCTACAGTCCCTTCCCACTATTGGGACATTCTATGCTGCA
AACTGTCCAAATGAAAACAGATGGATCAGAGTAATGGTATTAAATTGTCTTGGCCAGTTG
GCAGTAAAAGTACTGAGTGTTGATTTTGGCAATATTGAGGTGATTTCAGTTAATACTCTT
CGCCAACTGCCTTTGCAATTTAGACATCTTCCAATACAAGCCTTTGAAGCTATGTTAAGT
GGAGGCCAAAACAGAGAGGGCATTTGGTCAAAAGAGGCTTTGGGATATTTTAAGAGAATT
GAAGGTTGTACATTCATGGCTACTGTAAAAGATGTGGTCAGTGAAAAGTATGAAGTGGCT
CTTAAAACTGCAACAAATAAAGATGTAAGAGAACAACTTCTGTCATTTGAATTAAAAGTT
GTCTCAACAAATGCTTTCTGCTGTGGAATTCCACTAATCAAACCACCCCTTGATGCTGAT
GTGGAAATCATTATCACAGAAGTAGAACAGGGTGGATTATTTTATTGTCAGATTGCTGAT
GGGAATATTGCTTTATTTGAGAACATTACCAAAGTTCTCAAACAACATTATGAAGAAAGC
AGTGGAAGTAATGAAAACCTAGAACTTAAAGAAGACACCATGTATGCTGTTAAATCAGAC
AATGGACAGTGGTACAGAGCAATGGTTGAACAAGCCAATGAAAATGGTCAGCTGGTTGTG
CGTTACAGTGATTTTGGCAATATTGCCCAAGTTACAAGGGCTCAGATTTACCAGCTTCCA
GAGAAATTTCATACTTTTCCAATACAGGCAATTAAATGTAAGCTTCAAGATGCAAAACCG
ACAGATGCCAACAAGTGGCATGGAGGCTTCGTAAAAGTGTGTAGAGCACTGGTAAAAACC
CCAATCTCTGCAAGATTCATGGCCAATTGTAAAGATCACTACTCTGTTAAAGTCCCAAAG
ATGCTGAATAAGCTCATCACTGATAATATTGCTGAATACTGCTAA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[22-112] 1.29E-18 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[23-120] 1.1E-17 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[30-107] 13.532 |
| SMART |
RRM_dom (IPR000504) - T[31-103] 2.7E-14 |
| Pfam |
RRM_dom (IPR000504) - T[32-101] 2.7E-11 |
| Pfam |
Tudor (IPR002999) - T[232-353] 3.0E-25 - T[463-581] 1.0E-23 - T[656-776] 5.8E-23 |
| SMART |
Tudor (IPR002999) - T[283-341] 1.5E-14 - T[510-568] 1.4E-4 - T[707-764] 6.7E-11 |
| ProSiteProfiles |
Tudor (IPR002999) - T[284-343] 16.426 - T[511-570] 8.649 - T[706-766] 12.255 |
| Gene3D |
SNase_OB-fold_sf (IPR035437) - T[469-634] 5.9E-31 - T[664-814] 7.6E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TDRD1_HUMAN | 25.188 % | 136 | 1.23E-32 |
| TDR15_HUMAN | 25.065 % | 84.7 | 1.27E-16 |
