Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S518.g09666.01.t

Possible name(s)

NAPG

Gene model

Phmamm.CG.MTP2014.S518.g09666

Location

S518 [4,974 / 6,431]

Sequences

Amino acid sequence

Length: 279

>Phmamm.CG.MTP2014.S518.g09666.01.p
MNKTIFLNGLLLALAHFDHASELYLEDGTPDTAAMCLDRAGKIVEMNHPDWAISSYMKAA
QIYENEDESRFRSAAELVGKVARLQVKLNKLSEAVKSITHEKQLLSQVQGGDHGAGSRLT
CALVLVHLHIGDQVRAEQSIFDACDSIVGFGESEEYHALQNLIEAFDERNEEKAAQLLNM
PLFKYMDTAYAKLARSLHVQGYTESSSQQKHIFSKGVNKQNMAQLSEQFDNMADKMAYLQ
ASVPTVTDSELQSSNTNIPPNAMPPTHESRDVAEEIDLC

Nucleotide sequence

Length: 840

>Phmamm.CG.MTP2014.S518.g09666.01.t
ATGAACAAAACAATATTCTTGAACGGTCTATTATTAGCACTTGCTCATTTCGACCATGCT
TCTGAGCTGTACCTTGAAGATGGAACACCAGACACAGCAGCAATGTGTCTTGACAGGGCA
GGAAAAATTGTTGAAATGAATCATCCAGATTGGGCAATTAGTTCCTACATGAAAGCTGCT
CAAATTTATGAGAATGAAGATGAAAGTCGTTTTCGTTCGGCTGCTGAATTAGTTGGAAAG
GTGGCAAGGCTGCAGGTTAAACTGAACAAGTTGAGTGAGGCTGTAAAATCGATTACTCAT
GAAAAACAGTTGTTAAGTCAAGTTCAAGGTGGTGATCATGGTGCCGGAAGCAGATTAACC
TGTGCCCTTGTCCTTGTACATCTTCATATTGGTGACCAGGTGCGTGCAGAGCAAAGTATA
TTTGATGCATGTGACAGCATTGTTGGTTTTGGTGAAAGTGAAGAATACCATGCTCTGCAG
AATCTCATTGAAGCCTTTGATGAAAGAAATGAAGAAAAGGCCGCACAACTACTGAACATG
CCATTATTTAAATACATGGACACAGCATATGCCAAACTAGCCAGGTCTCTGCATGTTCAA
GGGTATACTGAGTCCAGTTCTCAGCAAAAACATATTTTTTCTAAGGGCGTTAACAAACAA
AACATGGCACAGCTTTCAGAACAGTTTGACAACATGGCTGATAAAATGGCCTATTTGCAA
GCATCAGTGCCCACTGTTACCGATTCAGAGTTACAGTCCAGTAATACTAATATTCCACCC
AATGCAATGCCACCAACTCATGAATCCAGGGACGTTGCAGAAGAAATAGATTTGTGTTGA

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[10-200] 1.9E-32
SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[12-177] 1.33E-15
PANTHER	NSF_attach (IPR000744) - T[17-219] 2.6E-47

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNAG_HUMAN	43.386 %	139	1.3E-39