- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Molecular Tool 'pFT>Foxd (Hudson 2016)' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S50.g01891.01.t
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
S50 [173,795 / 175,535]
Amino acid sequence
Length: 579
>Phmamm.CG.MTP2014.S50.g01891.01.p
MMLSSPPSKYQPFQQSYGGNMTNIPNGMQAPYVNTMNSISIGNQVGFNNPVNQGYGMNGH
HTAHSVQMAAAAAAAVGNPGMASPYAGMGPGVGISPNMALMSIRRTEKAYRRNYTHAKPP
YSYISLITMALQSSTSKMMTLSEIYNWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVP
RSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSDKKNKGGAGLDVQQSLEQLQNETA
SPPPSNPGSASSSPPDNHGAYIDSDSSIKSPEMEDRTASTSTHYNPVTMSHTHTAATNVT
SVHERLPVPQRHQEPSAYGSHIHGDHAENLLALQQHTQQISPASVGSSSPVNSESVGNLH
NMAPVTEKQSDGHTLGSRAQSVEVPQHNQVESSSGHQQEHHDFYSHYAQATAYAAAVQQH
PFAAVAAAHSFAPHPFSISSLMNVADQHHPQQQQQQQQQHYANSKELRAYQEAMHYYNSG
MNGFGTTGITPSTVNDTMPSQQCTNAQSPINSASSSTSVSTPSPASSSSLSHYSSALHYN
PLQLHEQHQAPLPLQSSHLEHSEHQQDTTNYYQGCVPAN
Nucleotide sequence
Length: 1,740
>Phmamm.CG.MTP2014.S50.g01891.01.t
ATGATGTTGTCGTCTCCCCCATCAAAGTATCAACCGTTCCAGCAATCATACGGAGGCAAC
ATGACCAACATTCCAAACGGAATGCAGGCACCCTACGTTAACACCATGAACTCGATTTCG
ATCGGAAATCAGGTCGGTTTTAACAACCCAGTCAACCAGGGCTACGGCATGAACGGACAT
CATACGGCCCACAGCGTACAAATGGCGGCGGCCGCCGCTGCAGCAGTCGGAAACCCGGGA
ATGGCATCTCCCTACGCCGGGATGGGACCGGGCGTAGGCATTAGTCCCAATATGGCGCTT
ATGTCAATTCGCCGTACTGAGAAGGCTTACCGTCGCAACTACACGCATGCAAAGCCACCA
TACAGCTACATTTCGCTCATTACCATGGCTTTGCAGTCATCTACCAGCAAAATGATGACT
CTTAGCGAGATCTACAACTGGATTATGGACCTTTTCCCATTCTACCGCCAGAACCAGCAA
CGTTGGCAAAACTCTATTCGCCACAGTCTTTCCTTCAATGATTGCTTTGTCAAAGTTCCA
AGATCGGCTGATAAACCAGGAAAGGGTTCTTATTGGTCTCTACATCCCGACGCTGGTAAT
ATGTTCGAAAATGGTTGCTACCTGCGACGCCAAAAGCGCTTCAAAAGTGACAAGAAGAAC
AAGGGTGGTGCCGGTCTAGACGTGCAGCAATCGCTTGAGCAGCTACAAAACGAAACTGCC
AGCCCACCACCGTCCAACCCCGGATCAGCAAGTAGCAGCCCACCGGACAACCACGGCGCT
TACATCGATTCGGACTCGAGCATAAAATCACCAGAAATGGAAGACAGAACAGCGTCAACA
TCAACGCACTACAACCCGGTAACGATGAGCCACACGCACACCGCTGCTACCAACGTTACT
TCAGTCCATGAGCGTCTTCCAGTTCCACAGAGGCACCAAGAACCTTCCGCATACGGGTCC
CACATCCACGGTGACCATGCTGAAAACTTGCTTGCGTTACAGCAGCACACTCAGCAAATC
AGCCCTGCATCAGTCGGTTCTTCATCCCCCGTCAACTCCGAATCAGTAGGCAACCTTCAC
AATATGGCGCCGGTGACCGAGAAACAAAGCGATGGACATACCCTTGGTTCACGCGCGCAA
AGCGTTGAGGTGCCGCAACACAACCAAGTTGAATCGTCATCTGGACATCAACAAGAACAC
CATGACTTCTACTCGCACTACGCCCAAGCTACTGCGTACGCTGCAGCCGTCCAGCAACAC
CCTTTCGCCGCCGTAGCTGCTGCACACTCCTTTGCACCTCATCCCTTTTCAATCAGCAGC
CTAATGAATGTCGCTGACCAGCATCATCCACAACAGCAGCAGCAGCAACAACAGCAGCAC
TACGCTAATTCGAAAGAGTTGCGAGCTTACCAAGAAGCGATGCACTACTACAACTCGGGC
ATGAACGGATTTGGTACAACAGGCATCACACCATCGACTGTCAATGACACAATGCCTTCG
CAGCAATGTACCAACGCGCAGTCACCTATCAATTCTGCATCATCATCCACATCAGTGTCG
ACGCCATCGCCTGCATCGTCGTCATCGCTCAGTCACTACTCGTCGGCCTTGCACTACAAC
CCGCTGCAATTGCACGAGCAACACCAGGCCCCTCTTCCTTTACAATCAAGTCACCTGGAA
CACAGCGAACATCAACAAGATACAACGAATTACTACCAAGGGTGCGTACCGGCCAACTAA
| Pfam |
Fork-head_N (IPR013638) - T[8-117] 1.9E-8 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[116-217] 4.7E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[116-206] 6.0E-59 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[117-212] 1.9E-39 |
| PRINTS |
Fork_head_dom (IPR001766) - T[118-131] 2.8E-23 - T[139-156] 2.8E-23 - T[162-179] 2.8E-23 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[118-212] 38.64 |
| Pfam |
Fork_head_dom (IPR001766) - T[118-203] 8.7E-37 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[118-131] . |
| CDD |
Fork_head_dom (IPR001766) - T[118-195] 1.20391E-48 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[162-168] . |
| Pfam |
Forkhead_box_C (IPR018533) - T[434-533] 4.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 75 % | 216 | 2.61E-65 |
| FOXA2_HUMAN | 76.087 % | 230 | 2.98E-69 |
| FOXA1_HUMAN | 83.036 % | 222 | 4.29E-66 |