Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S508.g09569.01.t

Possible name(s)

UPP1; UPP2

Gene model

Phmamm.CG.MTP2014.S508.g09569

Location

S508 [7,081 / 9,408]

Sequences

Amino acid sequence

Length: 291

>Phmamm.CG.MTP2014.S508.g09569.01.p
EKFCLSNPNLTDEDHLYHIALSTSDNLPQRFGDVKYVCMGGKERRMQKFAELLYDTLGKP
ENSELTEQPTPGHRLKNISQSGGRYCFYKVGPVAIVNHGIGNPSLSVVLNEMLKLIHHAG
CTDVSFFRIGTSGGLGMKPGTVIITKQSYNGLLENCYRQVICGKEIRYPADTNPQLAEDL
LKCAKDFKIEAIAGNTMGTNDFFEEQARLDGAFCEFSRQEKSDFLKRAHDEFGIRNFEME
SCCFSGLCARANLKCAIVCTTVVNRLERDDVTADKSLLEEWEFYPQQLVAE

Nucleotide sequence

Length: 875

>Phmamm.CG.MTP2014.S508.g09569.01.t
CGGAGAAGTTTTGCCTTTCTAACCCGAACTTAACAGACGAGGATCACCTGTACCACATCG
CTCTCTCAACTTCAGACAATCTTCCACAGAGATTCGGAGATGTCAAGTATGTTTGCATGG
GAGGCAAGGAAAGGAGAATGCAAAAATTTGCTGAGTTACTGTACGACACGTTGGGAAAGC
CGGAAAACTCGGAATTGACTGAGCAACCAACACCGGGTCACCGTCTGAAAAACATTTCGC
AATCTGGCGGACGTTACTGCTTTTACAAGGTTGGACCTGTGGCCATCGTCAACCACGGCA
TTGGAAACCCCTCACTATCTGTTGTACTAAATGAGATGCTAAAGTTAATTCATCACGCAG
GTTGCACTGACGTCAGCTTTTTTAGAATTGGAACGTCAGGCGGTTTAGGAATGAAACCTG
GAACGGTGATAATCACGAAACAATCTTACAACGGCTTACTCGAAAACTGCTACAGACAGG
TTATTTGCGGCAAAGAGATTCGATATCCCGCAGACACAAACCCACAGCTGGCAGAAGACT
TGCTAAAATGCGCTAAAGACTTTAAGATTGAAGCAATTGCGGGAAATACTATGGGTACAA
ACGATTTTTTTGAAGAGCAAGCACGACTTGACGGAGCTTTTTGCGAGTTCTCACGTCAGG
AAAAGTCGGATTTCCTCAAGAGAGCTCACGACGAATTCGGAATCCGAAATTTTGAAATGG
AAAGTTGTTGCTTCTCGGGACTGTGTGCAAGAGCCAATTTGAAATGTGCTATTGTTTGCA
CTACGGTTGTAAACAGACTTGAACGAGATGATGTCACCGCTGACAAAAGTCTGCTGGAGG
AATGGGAGTTTTATCCGCAGCAACTGGTGGCGGAG

InterProScan

TIGRFAM	Uridine_phosphorylase_euk (IPR010059) - T[11-290] 2.0E-94
SUPERFAMILY	Nucleoside_phosphorylase_sf (IPR035994) - T[17-289] 2.67E-37
Pfam	Nucleoside_phosphorylase_d (IPR000845) - T[37-269] 3.7E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UPP1_HUMAN	41.724 %	243	1.72E-79
UPP2_HUMAN	43.103 %	246	1.11E-80