- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S501.g09478.01.t
Possible name(s)
CSMD1; CSMD3; CUBN
Gene model
Location
S501 [835 / 2,809]
Amino acid sequence
Length: 423
>Phmamm.CG.MTP2014.S501.g09478.01.p
MLHCECLGFIYFLGTLICFCDGTKDDEVFVIGLFPQTIHEKANVTWPIPPPAFNDVQNLK
VTIMNSGDTAFSHLPSRLRRDDVICNAHRGSGVQGKKNQPQGGSRGDFNVGIQTAKHTVH
IKGDKEVTFNIENKVTVQDMIDSGVKIQNRAQVLFDLSASTVENLVGEIFSPHYPQPYPN
SADIACLVDIDIEKCCDRLTIYDGNSLHGPVIVILSGTLTNQNNLTMYQSTGSSMSLHLT
SDCSESKTGFRASVSSSVGVSSSTTETFPDVATTAEVITVSTSSGHNEICGDEYLYPELG
YNYYLSSLNYPDQYYNNLYCWWYIYSGSSDQVVVLQIIGFDVENGYDNVYLHNQTDLIAT
LTGSYLTNDQFFATEYMGISLTTDNIVPSRGFNFTYHLESTIDETCDRENLYPQMGQYYY
LPS
Nucleotide sequence
Length: 1,272
>Phmamm.CG.MTP2014.S501.g09478.01.t
ATGCTTCACTGTGAGTGTTTAGGTTTTATATACTTTCTGGGGACTTTGATCTGCTTTTGT
GATGGGACGAAAGACGACGAAGTATTTGTCATTGGACTTTTTCCCCAAACAATCCACGAA
AAAGCAAATGTCACGTGGCCCATTCCACCACCTGCATTCAATGACGTTCAAAACCTGAAG
GTCACTATCATGAACTCTGGTGACACAGCTTTTTCACACTTACCTTCCCGACTACGCAGA
GATGACGTCATTTGCAATGCACACCGAGGGAGTGGCGTACAAGGGAAGAAAAATCAGCCA
CAAGGAGGCTCAAGAGGTGACTTTAACGTTGGCATTCAAACTGCAAAGCACACTGTCCAC
ATCAAAGGCGATAAGGAGGTCACCTTCAACATCGAGAACAAAGTAACCGTGCAAGACATG
ATCGACTCCGGTGTGAAGATACAAAACAGAGCTCAGGTGCTGTTTGATCTTTCTGCTTCC
ACTGTTGAGAATTTGGTCGGTGAAATATTTTCTCCCCACTATCCTCAACCCTACCCGAAC
TCTGCTGACATCGCGTGCTTAGTCGATATCGACATCGAGAAATGCTGCGACCGACTCACC
ATCTATGACGGTAACTCCTTACACGGTCCAGTGATTGTGATTTTATCTGGTACACTGACC
AATCAGAACAATTTAACCATGTACCAGTCCACCGGAAGTAGTATGTCGTTGCATTTGACT
TCTGATTGTTCCGAATCAAAAACAGGTTTTAGGGCAAGTGTAAGTAGTTCGGTTGGTGTT
AGTAGCTCGACAACCGAAACTTTTCCCGATGTAGCAACAACTGCTGAGGTTATTACTGTC
TCAACCAGTTCTGGACATAATGAAATCTGTGGTGATGAATATTTGTATCCAGAACTGGGT
TACAATTATTACTTGTCTTCTCTCAACTACCCCGATCAGTATTATAACAACTTGTATTGT
TGGTGGTATATCTATTCTGGTTCTTCCGATCAAGTCGTTGTATTGCAAATAATTGGTTTT
GATGTAGAAAACGGCTATGATAATGTTTATCTGCATAACCAAACCGACCTTATTGCAACT
TTAACTGGATCATACTTAACAAATGATCAGTTTTTTGCAACAGAGTACATGGGAATTAGT
CTGACAACTGACAATATTGTGCCAAGCCGTGGTTTTAACTTCACGTATCACCTTGAATCG
ACTATTGATGAAACTTGTGATAGGGAGAATTTGTATCCACAAATGGGTCAATACTATTAC
TTGCCATCCTAA
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[157-257] 1.6E-8 - T[289-397] 3.1E-13 |
| SMART |
CUB_dom (IPR000859) - T[158-257] 8.9E-7 - T[290-399] 9.1E-8 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[165-254] 1.23E-16 - T[290-397] 7.72E-16 |
| CDD |
CUB_dom (IPR000859) - T[167-252] 5.4247E-12 - T[290-396] 1.28489E-12 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[290-399] 12.375 |
| Pfam |
CUB_dom (IPR000859) - T[302-396] 3.2E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|