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  1. Transcript 'Mooccu.CG.ELv1_2.S50...'
  2. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S493.g09402.01.t

Possible name(s)

AFG3L2; SPG7; YME1L1

Location

S493 [21,918 / 30,536]

Sequences

Amino acid sequence

Length: 628

>Phmamm.CG.MTP2014.S493.g09402.01.p
MLQIGVLRHGRLNLINTLNNVRSLSLGICMRLARNADRQHLLYLQHPLICRLGKTSQRFS
LKYRNLHSTSRCFQTPKEEGNKNQNNGRNLIFVGFLVSYLSFVLFRVLFASDGSDQSAEQ
PGVALASNVIHISWQDFVDDILPTGESETFKQVLAPVSKVVKKTNVTFKDVAGMKEAKQE
VMEFVDFLKKPSFYESLGAKMPRGCLLTGPPGVGKTLLAKAVATEADVPFIAKAGSDFVE
LIGGLGARRMRELFKEARGMSPCIIYIDEIDAVGAARDKHQRFGGSGEKDQTLNQLLVEM
DGMLSKEHQVIILASTNRSDMLDKALLRPGRFDRVIQIELPNRNEREEILLRYLNDLKLS
DKPPSYAPKLAAVTTGMSGADLANVCNEAAIYAAREGDKVITNKHLDYAVERVIAGAPKS
ATSVSPEERKVVAIHEAGHALIGWLLEHTDALAKVTIIPRTKAALGFARTVPSDRHLHTQ
EQLFDFMCMALGGRAAEDLVLGRYTQGAQDDLRKVTDMAYAQVKYLGFSEKIGPISFQDN
TYIKPFSDALSNTMDVEVRDVVKKAYARAKSVLAENRTTLDTLSSELFRRESLNYDDVES
LIGPPAYADKKQVSFKSKSKFVVLFEKI

Nucleotide sequence

Length: 1,887

>Phmamm.CG.MTP2014.S493.g09402.01.t
ATGCTCCAGATCGGAGTGTTAAGGCATGGTCGTTTAAATTTAATTAACACACTGAACAAT
GTTCGCTCACTTTCTCTGGGGATATGCATGAGACTCGCAAGGAATGCAGACAGACAACAT
CTGTTATATTTGCAACATCCTTTGATTTGCCGTCTTGGAAAAACAAGCCAACGATTCTCC
TTAAAATACAGAAACTTGCACAGCACTTCCCGCTGTTTTCAAACACCAAAAGAGGAAGGC
AACAAAAACCAGAACAATGGGAGAAACCTTATCTTTGTGGGATTTTTGGTCTCATATCTC
TCTTTTGTCTTATTCAGAGTGTTATTTGCATCAGATGGTTCTGATCAATCTGCAGAACAA
CCAGGTGTTGCTTTGGCATCAAACGTGATCCACATTTCATGGCAAGATTTTGTTGACGAT
ATTTTACCAACTGGAGAATCAGAAACCTTCAAACAAGTGCTGGCACCAGTATCAAAAGTT
GTGAAGAAAACAAATGTTACATTTAAAGATGTTGCTGGAATGAAAGAAGCAAAACAAGAA
GTCATGGAGTTTGTTGACTTTTTAAAGAAACCATCGTTTTATGAAAGCTTGGGTGCGAAA
ATGCCTCGTGGCTGTCTGCTCACTGGCCCACCCGGTGTTGGAAAAACACTTCTTGCGAAG
GCAGTCGCAACAGAAGCAGATGTTCCGTTTATCGCCAAAGCAGGGTCAGATTTTGTGGAA
CTTATCGGTGGATTGGGGGCCAGAAGAATGAGGGAGCTCTTTAAGGAGGCTCGAGGGATG
TCTCCTTGTATTATTTACATCGACGAAATAGATGCAGTCGGAGCTGCAAGGGATAAACAT
CAAAGGTTCGGTGGCTCTGGCGAAAAAGATCAAACACTAAATCAACTACTGGTTGAGATG
GACGGGATGTTAAGTAAAGAACACCAAGTTATCATACTTGCTTCTACAAACAGATCTGAT
ATGCTGGACAAGGCATTGCTTAGACCCGGGCGATTTGACAGGGTTATTCAGATAGAACTG
CCCAATCGAAATGAGCGAGAGGAAATACTCCTGCGGTATTTAAATGACCTGAAACTTTCT
GATAAACCTCCATCTTATGCTCCCAAATTGGCAGCAGTTACAACTGGAATGAGTGGTGCC
GATCTTGCCAATGTTTGTAATGAAGCTGCTATTTATGCTGCCAGGGAAGGAGACAAAGTG
ATAACAAATAAACATTTGGACTATGCAGTGGAAAGAGTGATTGCAGGGGCACCAAAGTCT
GCTACTTCTGTTTCTCCTGAAGAAAGGAAAGTTGTTGCAATCCATGAGGCAGGCCATGCT
CTGATTGGTTGGTTACTTGAACACACCGATGCTCTTGCCAAAGTCACTATTATACCAAGA
ACGAAAGCTGCTCTGGGATTTGCGCGCACAGTTCCATCCGACAGACATCTGCACACACAA
GAACAACTTTTTGACTTTATGTGCATGGCGCTTGGAGGTCGAGCTGCTGAGGACCTGGTG
TTGGGAAGATACACGCAGGGAGCACAGGACGACCTGAGGAAGGTCACCGACATGGCTTAT
GCGCAGGTGAAGTACTTGGGTTTCAGCGAAAAGATCGGTCCCATCTCGTTTCAGGACAAC
ACATATATAAAACCCTTCAGTGACGCTCTCAGCAATACAATGGACGTGGAAGTAAGAGAT
GTGGTCAAAAAGGCCTATGCCCGAGCTAAATCAGTTCTTGCCGAAAACCGCACCACCCTT
GATACGTTGTCAAGTGAATTGTTCCGTCGAGAATCGCTCAATTATGACGATGTAGAGAGT
TTGATTGGACCTCCAGCTTACGCCGATAAAAAACAGGTGAGTTTTAAAAGCAAATCAAAG
TTTGTTGTTTTGTTTGAAAAAATTTAA

InterProScan

TIGRFAM
FtsH (IPR005936) - T[162-602] 4.2E-165
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[162-413] 1.06E-62
SMART
AAA+_ATPase (IPR003593) - T[201-342] 2.6E-19
Pfam
ATPase_AAA_core (IPR003959) - T[206-340] 2.3E-38
Pfam
Peptidase_M41 (IPR000642) - T[424-601] 3.6E-55
SUPERFAMILY
Peptidase_M41-like (IPR037219) - T[424-607] 1.02E-56

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPG7_HUMAN 57.018 % 522 3.7E-177
AFG32_HUMAN 51.948 % 454 7.67E-151
YMEL1_HUMAN 39.462 % 317 2.73E-98