- Transcript 'KH2012:KH.C1.1004.v1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C5.25.v1.A...' >
- Transcript 'KH2012:KH.C4.547.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S493.g09402.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S493 [21,918 / 30,536]
Amino acid sequence
Length: 628
>Phmamm.CG.MTP2014.S493.g09402.01.p
MLQIGVLRHGRLNLINTLNNVRSLSLGICMRLARNADRQHLLYLQHPLICRLGKTSQRFS
LKYRNLHSTSRCFQTPKEEGNKNQNNGRNLIFVGFLVSYLSFVLFRVLFASDGSDQSAEQ
PGVALASNVIHISWQDFVDDILPTGESETFKQVLAPVSKVVKKTNVTFKDVAGMKEAKQE
VMEFVDFLKKPSFYESLGAKMPRGCLLTGPPGVGKTLLAKAVATEADVPFIAKAGSDFVE
LIGGLGARRMRELFKEARGMSPCIIYIDEIDAVGAARDKHQRFGGSGEKDQTLNQLLVEM
DGMLSKEHQVIILASTNRSDMLDKALLRPGRFDRVIQIELPNRNEREEILLRYLNDLKLS
DKPPSYAPKLAAVTTGMSGADLANVCNEAAIYAAREGDKVITNKHLDYAVERVIAGAPKS
ATSVSPEERKVVAIHEAGHALIGWLLEHTDALAKVTIIPRTKAALGFARTVPSDRHLHTQ
EQLFDFMCMALGGRAAEDLVLGRYTQGAQDDLRKVTDMAYAQVKYLGFSEKIGPISFQDN
TYIKPFSDALSNTMDVEVRDVVKKAYARAKSVLAENRTTLDTLSSELFRRESLNYDDVES
LIGPPAYADKKQVSFKSKSKFVVLFEKI
Nucleotide sequence
Length: 1,887
>Phmamm.CG.MTP2014.S493.g09402.01.t
ATGCTCCAGATCGGAGTGTTAAGGCATGGTCGTTTAAATTTAATTAACACACTGAACAAT
GTTCGCTCACTTTCTCTGGGGATATGCATGAGACTCGCAAGGAATGCAGACAGACAACAT
CTGTTATATTTGCAACATCCTTTGATTTGCCGTCTTGGAAAAACAAGCCAACGATTCTCC
TTAAAATACAGAAACTTGCACAGCACTTCCCGCTGTTTTCAAACACCAAAAGAGGAAGGC
AACAAAAACCAGAACAATGGGAGAAACCTTATCTTTGTGGGATTTTTGGTCTCATATCTC
TCTTTTGTCTTATTCAGAGTGTTATTTGCATCAGATGGTTCTGATCAATCTGCAGAACAA
CCAGGTGTTGCTTTGGCATCAAACGTGATCCACATTTCATGGCAAGATTTTGTTGACGAT
ATTTTACCAACTGGAGAATCAGAAACCTTCAAACAAGTGCTGGCACCAGTATCAAAAGTT
GTGAAGAAAACAAATGTTACATTTAAAGATGTTGCTGGAATGAAAGAAGCAAAACAAGAA
GTCATGGAGTTTGTTGACTTTTTAAAGAAACCATCGTTTTATGAAAGCTTGGGTGCGAAA
ATGCCTCGTGGCTGTCTGCTCACTGGCCCACCCGGTGTTGGAAAAACACTTCTTGCGAAG
GCAGTCGCAACAGAAGCAGATGTTCCGTTTATCGCCAAAGCAGGGTCAGATTTTGTGGAA
CTTATCGGTGGATTGGGGGCCAGAAGAATGAGGGAGCTCTTTAAGGAGGCTCGAGGGATG
TCTCCTTGTATTATTTACATCGACGAAATAGATGCAGTCGGAGCTGCAAGGGATAAACAT
CAAAGGTTCGGTGGCTCTGGCGAAAAAGATCAAACACTAAATCAACTACTGGTTGAGATG
GACGGGATGTTAAGTAAAGAACACCAAGTTATCATACTTGCTTCTACAAACAGATCTGAT
ATGCTGGACAAGGCATTGCTTAGACCCGGGCGATTTGACAGGGTTATTCAGATAGAACTG
CCCAATCGAAATGAGCGAGAGGAAATACTCCTGCGGTATTTAAATGACCTGAAACTTTCT
GATAAACCTCCATCTTATGCTCCCAAATTGGCAGCAGTTACAACTGGAATGAGTGGTGCC
GATCTTGCCAATGTTTGTAATGAAGCTGCTATTTATGCTGCCAGGGAAGGAGACAAAGTG
ATAACAAATAAACATTTGGACTATGCAGTGGAAAGAGTGATTGCAGGGGCACCAAAGTCT
GCTACTTCTGTTTCTCCTGAAGAAAGGAAAGTTGTTGCAATCCATGAGGCAGGCCATGCT
CTGATTGGTTGGTTACTTGAACACACCGATGCTCTTGCCAAAGTCACTATTATACCAAGA
ACGAAAGCTGCTCTGGGATTTGCGCGCACAGTTCCATCCGACAGACATCTGCACACACAA
GAACAACTTTTTGACTTTATGTGCATGGCGCTTGGAGGTCGAGCTGCTGAGGACCTGGTG
TTGGGAAGATACACGCAGGGAGCACAGGACGACCTGAGGAAGGTCACCGACATGGCTTAT
GCGCAGGTGAAGTACTTGGGTTTCAGCGAAAAGATCGGTCCCATCTCGTTTCAGGACAAC
ACATATATAAAACCCTTCAGTGACGCTCTCAGCAATACAATGGACGTGGAAGTAAGAGAT
GTGGTCAAAAAGGCCTATGCCCGAGCTAAATCAGTTCTTGCCGAAAACCGCACCACCCTT
GATACGTTGTCAAGTGAATTGTTCCGTCGAGAATCGCTCAATTATGACGATGTAGAGAGT
TTGATTGGACCTCCAGCTTACGCCGATAAAAAACAGGTGAGTTTTAAAAGCAAATCAAAG
TTTGTTGTTTTGTTTGAAAAAATTTAA
| TIGRFAM |
FtsH (IPR005936) - T[162-602] 4.2E-165 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[162-413] 1.06E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[201-342] 2.6E-19 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[206-340] 2.3E-38 |
| Pfam |
Peptidase_M41 (IPR000642) - T[424-601] 3.6E-55 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[424-607] 1.02E-56 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 57.018 % | 522 | 3.7E-177 |
| AFG32_HUMAN | 51.948 % | 454 | 7.67E-151 |
| YMEL1_HUMAN | 39.462 % | 317 | 2.73E-98 |