- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S486.g09313.01.t
Possible name(s)
BARHL1; BARHL2; GBX1
Gene model
Location
S486 [84,034 / 86,704]
Amino acid sequence
Length: 304
>Phmamm.CG.MTP2014.S486.g09313.01.p
MVNCYLLTDEPTSMKTSISDESAPIWPLGGDEEHAESNVDVTEDIPKPRTHSSVSSVSSD
ITKVSEKDTMNAYSPPGEVKKRPRTAFTPDQIKRLESEFHRNKYLSVGKRMELSKALKLT
ETQIKIWFQNRRTKWKREYLSEWEVWMHQNYYAMHGLYGATAAANALAAHSNPMSAPFVS
APGGGSPRTASSSPAAQSAHRSSVEEKITWNNGLGCEKFPEGLFNPIQSGQILRHGAFNT
TGALTASSSGFLPNLMANGALLRAYGLQANLSSVRPLPHLNGAPTIGQLVVPPTVPLSPQ
SLRR
Nucleotide sequence
Length: 915
>Phmamm.CG.MTP2014.S486.g09313.01.t
ATGGTTAACTGTTACCTTTTAACAGATGAACCCACGTCGATGAAAACTTCAATTTCGGAC
GAATCTGCTCCGATTTGGCCACTGGGCGGAGACGAAGAGCACGCGGAAAGCAACGTTGAC
GTCACAGAAGATATACCCAAGCCTCGTACGCACTCGAGCGTGTCGTCAGTGTCCAGTGAC
ATCACAAAGGTGTCAGAGAAAGACACAATGAACGCGTACTCCCCGCCCGGGGAAGTAAAG
AAACGTCCGCGCACCGCATTTACTCCCGACCAAATAAAACGACTCGAATCTGAGTTTCAT
CGCAACAAATATCTGTCAGTGGGAAAAAGAATGGAATTGTCCAAAGCCCTAAAGCTTACA
GAGACCCAGATCAAAATCTGGTTCCAAAATCGTCGCACCAAATGGAAGCGGGAATATCTG
AGCGAATGGGAGGTTTGGATGCATCAGAACTACTACGCAATGCACGGGCTGTACGGGGCT
ACTGCAGCAGCAAATGCGCTCGCAGCACACTCCAATCCGATGAGCGCACCGTTTGTATCG
GCACCGGGAGGTGGTTCCCCACGCACCGCGTCATCCAGCCCTGCAGCTCAATCTGCCCAC
AGGTCGAGTGTGGAAGAGAAAATAACCTGGAACAACGGGCTGGGATGTGAAAAATTCCCC
GAAGGCCTATTCAACCCTATACAGTCCGGTCAGATCCTTCGGCATGGAGCTTTTAACACT
ACAGGAGCGCTGACTGCGTCTTCAAGCGGCTTTCTTCCAAACTTAATGGCCAATGGGGCC
TTGCTGCGAGCTTACGGGCTTCAAGCCAATCTTTCGTCAGTTCGTCCGCTCCCCCATCTG
AATGGAGCGCCCACTATCGGGCAATTGGTTGTCCCCCCAACTGTGCCCCTTTCGCCACAG
TCATTACGCAGATAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[66-138] 3.38E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[78-138] 21.573 |
| SMART |
Homeobox_dom (IPR001356) - T[80-142] 5.3E-27 |
| Pfam |
Homeobox_dom (IPR001356) - T[81-137] 5.8E-23 |
| CDD |
Homeobox_dom (IPR001356) - T[81-138] 3.86663E-26 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[102-113] 1.3E-7 - T[117-127] 1.3E-7 - T[127-136] 1.3E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[113-136] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BARH1_HUMAN | 34.161 % | 90.5 | 8.65E-21 |
| BARH2_HUMAN | 38.636 % | 88.6 | 7.97E-20 |
| GBX1_HUMAN | 39.2 % | 86.7 | 2.84E-19 |
