- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S485.g09305.02.t
Possible name(s)
ARHGAP15; SYDE1; SYDE2
Gene model
Location
S485 [106,398 / 114,660]
Amino acid sequence
Length: 1,137
>Phmamm.CG.MTP2014.S485.g09305.02.p
MSEVLNNTVEMAPTINQWDVHETTFKRSQSMPPERRKRRLQQYIPDSTQTRISESSETND
QPNGNAETKGVEIRRNKNGFKGMSFRGRKTDVRVSTINPDQLFITNEMKSMLQNGGKPPL
QNGSMSHANGVVTKPQTPVNRTKHSKGNGLVKMLQGGVRRISSLSEKHGPSTILTKTIEI
DRSKDGSLGIFIKKRKVPKQFDNGAAKQGIFVSRLDTSCKVSRENLLHVGDQILSINNVD
IVDQDVKMVAGMMCLPNNLVLKVRSSHKSTSRPKNYQVIKNPQLQRIVEGKSSDVDKVAL
PNSNHNVVVAEPSNKTATLNSMYDNDRVDLSLPVKNKKPNNNLARNSVQIRFDESFQILL
DAIADCEKPKNVNNNNCSSEVIHNSKGVDDANFQSDLLSSTTAQSEDIPEDCNSLVNDIL
STINGQGTPTELKTNPGHPDVDNYSSSNGLRNVPTTSDSNSAHFHTTMKLIDDPDYDEVP
TTDDESSYSCNDEVNVDAFGDHIKYSRKYGQHEKNPSTSTSSSSLNSQGVETVSHHTHMK
GHNPDLTRSLSDAGWQSSADSVIHQQPCCKKASMPRFPVAHTDFTTRECSCMSRQSSNSI
NSITVDKKRQWLESGPQVSDELQMRLDGLHHSTKEGKLKELPPRKVSVTSQKNGDLKVDT
KKRNSCKRRPSESSSSSSGHSSNSPGIPRSHKSSLDSPSSVSDFTFHRKNSIKNPMEKSA
KSMLSVSSPSSPSPKTFIYSDKSENDSECSVPHPKAEDSGITATEKVPQTTKVSHPTLLV
NGSPEEPGNSNTSNRSFTAVKITSPSRSRKKNWGKKFTKKFKLGGSSENSMSEYACWMGE
DEQQKVEGNLLADSSKVSTQHNLQKIINKSDSAVLNRYHLDISMAHQRRLSRQLEWDNVL
PDPSIKALTLSQFKKYKPVSALHHQFLPAIDGCLVITLYGVRELKKTLCEAYCLVQVDNA
TTKRIGTTMQTCRGAVAWNQCFELMVNKARDLHVTLYTWETRGGKHKVCSYATLNLPTLI
QGAKLQSNFSERLAVRLEPRGTLYMKVALEKNPSSPGPLVFGADLQSIVDRESSGYGIPS
LVHSCIEEVEKRGMQVVGIYRLCGSAIVKRELRRKVEEAKGVTLLTSDNYPDVNVIT
Nucleotide sequence
Length: 3,903
>Phmamm.CG.MTP2014.S485.g09305.02.t
CACCAAGCAAAATCATCGAAGGAATAATTAAAACAAACGTAGTAAACACTAGGTGTCGCC
TTGTGGTCGAATTTATTTTACCCTCCCCTCCATTCCATTCGACCATTCCATTCCAAGCGT
TTGTTCGGTAGCGTTGATGCGCTTCATTTGCTTTTGGCGTCGCGCGCTATGCGACAGTGA
GGTTTGATGTTTTTCCGAAGGTTGCCAGGACAGATAAATTTGTTTATTCACTAATGCCAG
AAAAACACGGCATTAAGGATATACCGTTTTTGCAACAGATTGTTGCTGTAATAATATTGT
TTCAAGGACGTTGTGTAAACGCAAACCCGAGTTTAAGTATAACTTTATATTTGCAGCATA
GTTTGCTTACTCAGTTAGGCCGAAGTTTCAGGGCTTGACTGTGTTAACAGTATTTTTCTA
ATGTTAACAACAAACGAATGAAGCTTCAAACATGTGACCAGCAACTTTTGATTATTGGGG
CACGTTCATTATGAGTGAAGTACTCAACAACACTGTAGAAATGGCACCTACTATAAATCA
ATGGGATGTACATGAAACTACATTTAAAAGATCGCAGTCTATGCCACCTGAACGCCGCAA
AAGACGTCTCCAACAGTATATACCTGATTCTACACAGACTCGGATATCTGAATCCTCTGA
AACAAATGATCAACCAAATGGAAATGCTGAAACAAAAGGAGTGGAGATTAGAAGAAATAA
AAACGGGTTCAAAGGAATGTCATTCAGAGGCCGAAAGACTGATGTTCGAGTTAGTACAAT
TAACCCTGATCAGCTTTTCATCACAAATGAAATGAAATCAATGCTGCAAAATGGAGGAAA
ACCACCTTTGCAAAATGGGTCAATGTCACATGCAAATGGTGTCGTAACTAAACCACAGAC
ACCAGTCAACAGAACAAAGCACTCAAAAGGCAATGGACTTGTTAAAATGCTACAAGGAGG
TGTTCGACGTATTAGCAGTCTATCAGAAAAACATGGCCCTTCCACGATCCTTACAAAAAC
TATAGAAATAGATCGAAGCAAAGATGGAAGTTTAGGAATCTTTATCAAGAAGCGCAAAGT
TCCAAAACAGTTTGATAATGGTGCTGCAAAACAGGGAATATTTGTAAGTCGCCTTGATAC
ATCATGTAAAGTGTCAAGGGAAAATCTTTTGCATGTGGGCGATCAAATATTGTCAATCAA
CAATGTTGACATCGTAGACCAGGATGTTAAGATGGTTGCTGGGATGATGTGCTTACCCAA
TAATCTTGTTCTGAAAGTCCGTTCCTCGCACAAGTCTACCAGTCGCCCTAAGAACTACCA
AGTAATTAAAAATCCCCAACTGCAACGTATTGTGGAAGGAAAATCAAGTGATGTTGACAA
AGTGGCTTTACCGAATTCAAATCACAATGTTGTTGTTGCTGAACCAAGTAACAAAACTGC
AACACTGAATAGCATGTATGACAATGATAGAGTGGACTTATCTTTGCCTGTCAAAAATAA
GAAGCCAAACAACAATCTAGCACGAAATTCAGTCCAGATAAGGTTTGATGAATCCTTCCA
AATTTTACTTGATGCAATTGCAGACTGTGAAAAACCAAAAAATGTAAACAACAACAACTG
TAGTAGTGAAGTTATTCACAACTCAAAGGGTGTTGACGATGCAAACTTTCAAAGTGATTT
GCTTTCGTCAACCACAGCACAGTCAGAAGATATTCCAGAGGACTGTAATAGTTTGGTGAA
TGACATTTTAAGCACCATAAACGGCCAGGGGACACCTACAGAATTAAAAACAAATCCAGG
TCACCCTGATGTTGACAATTATTCCAGCAGTAATGGATTAAGAAATGTCCCAACCACTTC
AGATAGCAACAGTGCTCATTTTCACACCACCATGAAACTAATAGATGACCCGGACTATGA
CGAAGTTCCCACTACGGATGATGAATCCTCATACAGCTGCAATGACGAAGTAAATGTTGA
TGCATTTGGTGATCATATAAAGTATTCACGCAAATACGGACAACATGAGAAGAATCCAAG
TACATCAACTTCATCATCATCCCTGAACTCTCAAGGGGTTGAAACAGTTTCTCACCACAC
ACATATGAAGGGTCATAACCCTGACCTTACCAGGTCACTCTCAGATGCTGGCTGGCAATC
GTCAGCAGACAGTGTCATACACCAACAACCATGCTGCAAAAAAGCATCCATGCCACGCTT
TCCTGTTGCCCACACTGACTTTACAACACGAGAGTGCAGTTGCATGTCTCGACAGTCCAG
CAATTCAATTAACAGTATTACAGTTGACAAAAAGCGACAATGGCTGGAATCAGGGCCGCA
AGTTTCTGATGAGTTACAAATGCGACTGGATGGACTGCATCACTCGACAAAAGAAGGAAA
ACTAAAAGAATTGCCCCCTCGAAAAGTCAGTGTCACCTCGCAAAAGAATGGAGATTTAAA
GGTTGATACAAAAAAAAGAAACAGCTGCAAGCGTCGACCTTCGGAGTCGTCAAGTAGCAG
CAGTGGACATTCCTCCAACTCTCCTGGAATCCCACGATCCCACAAAAGTTCTCTGGACAG
CCCAAGCTCTGTCAGTGATTTCACATTTCACAGAAAAAACAGCATAAAAAATCCCATGGA
GAAATCTGCTAAAAGCATGCTGTCAGTTAGCTCTCCATCTTCGCCAAGCCCTAAGACATT
TATCTACAGTGATAAATCCGAGAATGATTCTGAATGCTCAGTACCACACCCCAAGGCAGA
GGACTCTGGCATTACAGCGACAGAAAAAGTTCCACAAACAACCAAGGTTTCCCATCCTAC
TTTGTTGGTCAATGGAAGTCCGGAAGAACCAGGTAACTCCAATACCAGCAACAGGTCCTT
TACCGCAGTGAAAATAACCTCACCATCACGATCAAGGAAAAAGAATTGGGGCAAAAAATT
TACAAAGAAATTCAAACTTGGGGGTAGTTCTGAAAATTCGATGAGTGAATATGCATGCTG
GATGGGGGAAGATGAACAACAGAAGGTTGAAGGCAATTTACTTGCAGACAGCTCCAAGGT
GTCAACACAACACAATCTACAGAAGATCATAAATAAAAGTGATTCGGCGGTGCTAAATCG
TTATCACCTCGATATCAGCATGGCACACCAGAGAAGATTAAGTAGACAGTTGGAATGGGA
TAACGTTTTGCCAGATCCATCAATCAAGGCACTCACACTGTCCCAGTTTAAAAAATACAA
ACCTGTATCTGCTCTCCACCATCAGTTTTTGCCTGCTATCGATGGCTGTCTTGTAATAAC
ACTGTACGGGGTACGGGAACTTAAAAAGACCTTGTGTGAGGCCTACTGCCTTGTACAAGT
GGACAATGCCACAACAAAGCGAATCGGAACCACAATGCAAACCTGCCGTGGCGCTGTGGC
ATGGAACCAGTGCTTTGAGCTGATGGTCAACAAGGCCAGGGATTTACACGTCACACTTTA
CACATGGGAAACAAGAGGTGGCAAGCACAAAGTTTGCTCATATGCCACTCTTAATCTCCC
AACACTAATCCAAGGTGCCAAACTTCAATCCAACTTTTCTGAGCGACTTGCAGTGAGACT
GGAACCTCGTGGCACATTGTACATGAAGGTTGCGCTGGAAAAGAATCCATCTAGCCCCGG
GCCACTAGTTTTTGGTGCTGACCTTCAAAGCATTGTAGACCGTGAAAGTTCTGGATATGG
CATTCCTTCATTAGTGCATTCTTGCATAGAAGAAGTGGAAAAACGTGGAATGCAGGTGGT
GGGCATATATCGACTATGTGGTTCCGCAATTGTAAAGAGGGAGCTTCGACGAAAGGTTGA
AGAGGCCAAGGGTGTAACTCTGCTTACCTCTGACAACTACCCTGATGTGAATGTCATAAC
AGG
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[174-267] 3.6E-10 |
| ProSiteProfiles |
PDZ (IPR001478) - T[177-241] 12.164 |
| Pfam |
PDZ (IPR001478) - T[178-249] 5.3E-7 |
| SMART |
PDZ (IPR001478) - T[186-267] 4.8E-5 |
| Gene3D |
C2_domain_sf (IPR035892) - T[931-1056] 1.3E-8 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[1058-1135] 4.91E-12 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[1059-1137] 8.1E-17 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[1063-1137] 15.622 |
| Pfam |
RhoGAP_dom (IPR000198) - T[1079-1136] 3.1E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYDE2_HUMAN | 37.727 % | 160 | 9.67E-40 |
| SYDE1_HUMAN | 33.333 % | 145 | 1.2E-35 |
