- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S482.g09258.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
S482 [100,381 / 110,130]
Amino acid sequence
Length: 896
>Phmamm.CG.MTP2014.S482.g09258.01.p
MERHGWAKGKGLGRNESGISEPIKVSIKADSTGVGHDASKQFTFHWWEHAFETASKNIEV
KEEEDGVVLTAVDTCITTATNKIYKKSLTAKSMLYGRFVKSGILNNGLIEKSDSNNSSDE
SSDEDDSHRPLTKDLQMLTDEDLFNACGGRTAHKEKVKEIFYHAYNGYLDNAYPYDELRP
LTCDGVNTWGSFSLTLVDALDTLAILGNYTEFRRVANLLVDTLDFNQNINASVFETNIRV
VGGLLSAHLLAPKAGMEVDPEWPCKGPLLTLAVDLAKKILPAFDTQTGMPYGTINLKYGV
DPKETPETCTAGVGTFLVEFAALSRLTGDQSFENIALRAVHALNASKSALGMIGNHINVV
TGKWTALDAGVGAGVDSYYEYLVKGAIMLNKPDLMDIFKEFLKPIEQHIKQGDWYMWVNM
NTGHTTMPVHQSLDAFWPGLQTLYGDVEKGYKTLLNYYSVWYRYGGTPEFFSIPHNAPIQ
KREGYPLRPELIESTLFMYRATKDPALLEFGEALLYSINATARTECGFATAGKIYIDDYS
YASNIERNKVPMTNNFFEAANCIGLFYSTPSGDFVPIAIQLVPGDVESIFTPTDKANDWI
LAKMYFRTTQSCIHEWVAHFFLTHGLSETFSVGTFRSLPHCHPLYKLLRPHLVSVVAVNE
GARRSLLPPQSLANQALALCVEDPCLLPNYHYRDDALDVWNVINNYVKRVISFFYRCNVD
VKNDFELQGWASELANEGLGWQDGNTRGMPEKIETVDELVRICTIIIFMSSAQHAAVNFG
QMETYQFVPNAPGSLLLPPHKKGEGNLKRILDTLPGPNIGLLLVTFAYALSKYAEDEVFL
GDFVEDLFVEEEVKEIQKDFTADLNKLDVKFNNRNKSLKYPYWYLLPDKIPVDINV
Nucleotide sequence
Length: 2,691
>Phmamm.CG.MTP2014.S482.g09258.01.t
ATGGAAAGACATGGATGGGCAAAAGGCAAAGGCCTTGGCAGAAATGAGAGTGGAATTAGT
GAACCGATTAAAGTTTCAATAAAGGCTGACTCAACTGGAGTTGGTCATGATGCGTCGAAA
CAATTTACTTTTCATTGGTGGGAGCATGCATTTGAAACAGCCAGCAAAAACATTGAAGTA
AAGGAAGAGGAGGATGGTGTTGTCCTTACAGCAGTGGACACATGTATTACCACTGCCACC
AACAAGATCTACAAAAAGTCACTGACTGCAAAAAGTATGCTCTATGGGAGGTTTGTAAAG
AGTGGAATCTTGAACAATGGTCTGATCGAAAAATCAGACAGCAACAATTCATCTGATGAG
AGCAGTGATGAAGATGACAGCCACAGACCTTTAACTAAAGATCTACAAATGTTAACAGAT
GAAGATTTGTTTAATGCTTGTGGAGGTCGAACTGCTCACAAGGAAAAGGTGAAGGAGATA
TTTTACCATGCATACAATGGGTATTTAGATAATGCTTACCCATATGACGAGTTACGTCCA
TTGACATGTGATGGGGTCAACACTTGGGGCAGTTTTTCTCTGACTCTTGTGGATGCATTG
GACACATTAGCAATTTTGGGAAACTACACTGAATTTAGAAGAGTTGCCAACTTGTTGGTA
GACACTTTGGATTTCAATCAAAACATTAATGCATCTGTGTTTGAAACCAATATAAGAGTT
GTTGGGGGATTGCTGTCCGCCCATTTGCTTGCTCCGAAAGCAGGAATGGAAGTAGACCCT
GAATGGCCCTGCAAAGGACCATTGTTGACTTTGGCAGTTGACCTGGCAAAAAAGATATTA
CCTGCATTTGATACACAAACTGGAATGCCTTATGGAACAATCAACCTTAAATACGGTGTT
GATCCAAAGGAAACACCTGAAACCTGTACCGCTGGAGTTGGGACATTTCTTGTAGAATTT
GCAGCATTAAGCAGGTTAACTGGTGACCAAAGCTTTGAAAATATTGCTCTTAGGGCTGTA
CATGCTCTTAACGCATCAAAGTCAGCTTTAGGTATGATTGGAAATCATATTAATGTTGTC
ACTGGAAAGTGGACAGCATTAGATGCTGGAGTTGGTGCAGGAGTGGACTCATATTATGAA
TACTTAGTGAAGGGGGCAATTATGCTTAACAAACCTGACCTGATGGACATTTTTAAGGAA
TTCCTGAAACCAATTGAGCAACACATTAAACAAGGAGACTGGTACATGTGGGTAAATATG
AATACTGGACACACAACAATGCCCGTCCATCAATCTCTGGATGCATTCTGGCCAGGGCTT
CAGACTTTGTATGGTGATGTTGAAAAAGGCTACAAAACCCTACTCAACTACTATTCTGTG
TGGTATCGATATGGTGGCACCCCAGAATTCTTCAGCATACCTCATAATGCACCTATACAA
AAACGTGAAGGTTATCCTTTACGGCCAGAGCTGATTGAAAGCACTCTGTTCATGTACCGG
GCAACCAAAGACCCAGCACTTCTTGAATTCGGCGAAGCTTTGCTTTATTCCATCAACGCA
ACTGCTCGAACCGAGTGCGGCTTTGCAACGGCTGGAAAAATTTACATAGATGATTACAGT
TATGCTTCAAACATTGAAAGAAACAAAGTTCCAATGACGAACAACTTTTTCGAAGCTGCA
AATTGCATTGGCCTGTTCTATTCTACACCATCAGGGGATTTTGTTCCGATTGCCATTCAA
TTGGTTCCTGGTGATGTTGAATCTATTTTCACTCCGACCGATAAAGCAAACGACTGGATC
CTTGCAAAAATGTATTTCAGAACAACACAAAGTTGCATACACGAGTGGGTTGCTCACTTT
TTTCTCACACATGGCTTATCCGAAACATTTTCTGTGGGTACTTTCCGATCTCTACCGCAC
TGTCATCCGCTCTACAAACTTTTACGGCCTCATTTGGTGTCAGTTGTGGCAGTTAACGAA
GGAGCCAGAAGATCTCTTCTTCCTCCTCAATCTCTGGCCAATCAAGCTCTTGCACTTTGT
GTGGAAGATCCGTGCCTGTTGCCAAACTATCATTATCGCGACGATGCATTAGATGTTTGG
AACGTAATCAACAACTACGTGAAACGGGTGATCAGTTTCTTCTACAGGTGCAATGTGGAT
GTGAAAAACGATTTCGAACTTCAAGGATGGGCATCGGAGCTGGCCAACGAAGGGTTGGGT
TGGCAGGATGGAAATACAAGAGGAATGCCTGAGAAAATCGAAACAGTGGATGAATTGGTT
CGCATTTGCACGATCATAATCTTTATGAGTTCGGCTCAACATGCGGCGGTCAACTTTGGT
CAAATGGAAACTTACCAGTTTGTTCCAAACGCACCAGGATCTCTTCTACTTCCACCTCAC
AAGAAGGGAGAGGGAAATCTGAAAAGAATCCTAGATACACTTCCTGGACCCAACATTGGT
TTGCTTCTGGTCACTTTTGCTTATGCCTTGTCTAAGTATGCCGAAGATGAGGTATTTTTG
GGTGATTTTGTGGAAGATTTGTTTGTCGAAGAAGAAGTTAAAGAAATCCAGAAAGATTTC
ACAGCAGATTTGAACAAGCTTGATGTTAAGTTTAACAACCGAAACAAATCACTCAAGTAT
CCCTATTGGTATCTGCTGCCTGACAAAATTCCAGTCGATATCAATGTTTAA
| SMART |
G_patch_dom (IPR000467) - T[1-37] 1.8E-5 |
| Pfam |
G_patch_dom (IPR000467) - T[1-36] 1.3E-10 |
| ProSiteProfiles |
G_patch_dom (IPR000467) - T[1-39] 14.22 |
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[147-547] 4.6E-122 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[151-538] 1.7E-117 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[160-180] 3.7E-49 - T[193-207] 3.7E-49 - T[230-248] 3.7E-49 - T[281-300] 3.7E-49 - T[372-389] 3.7E-49 - T[429-445] 3.7E-49 - T[486-510] 3.7E-49 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[161-531] 2.7E-89 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[501-896] 1.96E-102 |
| ProSiteProfiles |
LipOase_C (IPR013819) - T[532-896] 63.243 |
| Pfam |
LipOase_C (IPR013819) - T[564-672] 1.2E-17 - T[687-878] 2.3E-30 |
| ProSitePatterns |
LipOase_CS (IPR020834) - T[641-651] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 39.152 % | 253 | 2.54E-71 |
| EDEM2_HUMAN | 62.169 % | 514 | 3.34E-173 |
| EDEM1_HUMAN | 38.393 % | 293 | 6.76E-88 |