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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.C7.696.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4718.g18523.01.t

Possible name(s)

FBXL7; NLRP5; NOD2

Gene model

Phmamm.CG.MTP2014.S4718.g18523

Location

S4718 [2,572 / 4,769]

Sequences

Amino acid sequence

Length: 254

>Phmamm.CG.MTP2014.S4718.g18523.01.p
MSKSISRTKLVQVCSWLQEIDDEKFYQEVAAFLPLKIYLTGNILLTDVSSITEVLSHAEA
KHEIQISEHCKFPHGSLKEFLENLGKPNIKMKLLDLSGRKVTDKIAFGIASCAHNIEELD
LGKCTKCKLTTAGICKIAEAISKLSQPLGGNNVTDESASAIASCIHNIEELNLPDCELTS
VGFCKIAVAISKLSQPIKSLNLTRNKVTDESASAIASCIHNIEELDLDDCQLTSVGICKI
AEAISKLSQPVSLT

Nucleotide sequence

Length: 765

>Phmamm.CG.MTP2014.S4718.g18523.01.t
ATGAGCAAAAGCATAAGCAGGACAAAGCTGGTGCAAGTCTGCTCATGGTTGCAAGAAATT
GATGATGAAAAATTTTATCAAGAAGTTGCCGCATTTTTGCCTTTGAAGATATATTTAACT
GGCAACATACTTTTGACTGATGTCTCAAGCATTACAGAAGTGCTGAGTCATGCTGAAGCC
AAACATGAGATCCAGATTTCAGAGCACTGCAAATTTCCCCATGGCAGCTTGAAAGAGTTT
TTAGAAAATTTGGGGAAACCCAACATAAAGATGAAATTATTGGACCTTAGTGGGAGGAAA
GTCACTGATAAAATTGCATTTGGAATAGCTTCGTGTGCTCATAATATTGAGGAATTGGAT
CTAGGGAAATGTACAAAATGTAAACTGACAACTGCTGGAATTTGTAAAATTGCAGAAGCT
ATTTCCAAACTTTCACAACCACTTGGTGGGAACAATGTCACTGATGAAAGTGCATCTGCA
ATAGCTTCCTGTATTCATAATATTGAGGAACTGAATCTGCCGGATTGTGAACTGACAAGT
GTTGGATTTTGTAAAATTGCAGTAGCCATTTCCAAACTTTCACAACCAATTAAATCATTG
AACCTTACGCGGAACAAAGTCACTGATGAAAGTGCATCTGCAATAGCTTCCTGTATTCAT
AATATTGAGGAATTGGATCTGGATGATTGTCAGCTGACAAGTGTTGGAATTTGTAAAATT
GCAGAAGCCATTTCCAAACTTTCACAACCTGTAAGTTTGACCTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[8-254] 7.9E-30
SMART
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[113-140] 44.0 - T[165-189] 76.0 - T[194-218] 410.0 - T[219-243] 98.0
Pfam
Leu-rich_rpt (IPR001611) - T[148-162] 1.9 - T[197-216] 0.0019 - T[220-239] 0.85

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value