Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S468.g09077.01.t

Possible name(s)

ALDH1A3; ALDH1L2; ALDH7A1

Gene model

Phmamm.CG.MTP2014.S468.g09077

Location

S468 [62,333 / 67,674]

Sequences

Amino acid sequence

Length: 368

>Phmamm.CG.MTP2014.S468.g09077.01.p
GPGHALMEMWNPVGVVGVITAFNFPVAVYGWNAAIALTCGNSVLWKPAPTVNLSTIATQR
IMADVFENNNLPPEICTLVCSGADVGAKMADDSRVDLLSFTGSTPVGQKVGVAVQARFGK
KILELGGNNAITVLKDADLDMVVRSTLFASVGTQGQRCTSARRLILHKSIYDNVLERLKK
AYSQVKIGDPLKDDIIYGPMHSKAGVELYKSTIEEAIKLGGKIEVGGKVLDGPGNFVQPT
IVSGLTHDSLLVLRESFVPILYVLKLNGDFDEAIGYNNEVDQGLTSSVFTQNLSNIFKWL
GPKGSDCGIINVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSKELP
LAQGIKFD

Nucleotide sequence

Length: 1,249

>Phmamm.CG.MTP2014.S468.g09077.01.t
GGACCTGGCCATGCACTCATGGAAATGTGGAACCCAGTAGGTGTTGTTGGAGTAATTACA
GCATTTAACTTTCCTGTAGCAGTTTATGGCTGGAATGCAGCAATTGCTCTGACATGTGGC
AACTCAGTGTTATGGAAACCTGCACCAACAGTCAACCTATCGACCATTGCTACACAGAGA
ATAATGGCTGATGTTTTTGAAAACAACAACCTTCCCCCTGAAATCTGCACTCTGGTGTGT
TCTGGGGCTGATGTTGGAGCCAAAATGGCCGATGACAGTCGAGTTGACCTCCTATCATTC
ACTGGAAGCACACCGGTGGGGCAAAAAGTGGGCGTAGCGGTACAGGCTAGGTTTGGAAAA
AAAATTCTGGAGTTGGGAGGAAATAATGCAATTACTGTCTTGAAAGATGCTGACCTTGAC
ATGGTAGTAAGAAGCACGTTGTTTGCCAGTGTGGGAACACAGGGTCAACGATGTACTTCT
GCTAGACGTCTCATCTTACACAAGTCGATCTATGACAATGTGCTGGAGCGTTTGAAGAAG
GCATACAGTCAAGTAAAAATTGGAGATCCATTGAAAGATGACATAATATATGGCCCCATG
CATTCCAAAGCGGGAGTGGAACTGTACAAATCCACTATTGAGGAAGCAATAAAATTGGGA
GGAAAAATTGAAGTTGGTGGAAAGGTTTTGGATGGACCTGGTAACTTTGTTCAACCAACT
ATTGTGTCCGGACTAACTCACGACAGTCTACTTGTTTTGCGGGAGTCCTTTGTCCCCATT
TTGTATGTTTTAAAACTTAACGGTGATTTTGATGAAGCTATCGGTTACAACAATGAAGTT
GACCAAGGATTGACAAGCAGCGTATTTACACAAAATTTGTCCAATATTTTTAAATGGTTG
GGTCCCAAGGGATCTGACTGTGGAATAATAAATGTGAACATTCCAACAAGTGGTGCTGAA
ATTGGTGGAGCGTTCGGAGGTGAAAAACACACTGGAGGTGGTAGGGAGTCAGGGTCCGAT
GCATGGAAACAATATATGCGCAGATCAACATGCACAATCAACTACAGCAAAGAGTTGCCG
TTAGCACAAGGAATCAAGTTTGACTGATCAACCTCAACACAGGATAACACACTGTTTGTC
CACTATCTTTTAACTTCTCCCAAGTCCTCAATATGGTCTTCGTCAATCTGTGAAAAAAAA
ACAATAATCTGTTTATACTTTGAAAAAACACGCTGAAAACCATTCCAGG

InterProScan

Gene3D	Ald_DH_N (IPR016162) - T[2-345] 2.1E-114
SUPERFAMILY	Ald_DH/histidinol_DH (IPR016161) - T[2-357] 1.23E-100
Pfam	Aldehyde_DH_dom (IPR015590) - T[3-349] 1.7E-99
ProSitePatterns	Ald_DH_CS_GLU (IPR029510) - T[123-130] .
Gene3D	Ald_DH_C (IPR016163) - T[127-320] 2.1E-114

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
AL1A3_HUMAN	32.102 %	176	2.21E-50
AL1L2_HUMAN	30.172 %	179	8.49E-50
AL7A1_HUMAN	65.847 %	526	0