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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S11...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4667.g18509.01.t

Possible name(s)

LRRC34; NOD1; SLITRK4

Gene model

Phmamm.CG.MTP2014.S4667.g18509

Location

S4667 [105 / 1,616]

Sequences

Amino acid sequence

Length: 224

>Phmamm.CG.MTP2014.S4667.g18509.01.p
MESISNLSQPIKTLRMSGNTIDEKAENSLFSCLHNIQEELSVSESCISEEFKSKYSRLPE
PIKSLNLRGNKVTDESVSAIASCIHNIKELHLWECELTIVGIWKIAEAISKLSQPIKVLN
LSMNKVTDESASAIASCIHNIEELYLGYSKMTSVGICKIAEAISNLTQPIKVFSIFGTTI
DEKAENSLFGCLHNIQDTLNVSKSCISEEFVSKYSRLPEPVRET

Nucleotide sequence

Length: 675

>Phmamm.CG.MTP2014.S4667.g18509.01.t
ATGGAATCCATTTCCAACCTTTCACAACCAATAAAAACACTTCGCATGTCTGGAAACACA
ATTGATGAAAAAGCAGAAAATAGTTTGTTCAGTTGTTTGCACAACATACAAGAAGAACTT
AGTGTATCAGAATCATGCATAAGTGAAGAGTTTAAATCAAAATACTCAAGATTACCTGAA
CCAATTAAATCATTGAACCTTAGAGGAAACAAAGTCACTGATGAAAGTGTATCTGCAATA
GCTTCCTGTATTCATAATATTAAGGAGCTGCATCTGTGGGAGTGTGAACTGACAATTGTT
GGGATTTGGAAAATTGCAGAAGCTATTTCCAAACTTTCACAACCAATTAAAGTATTGAAC
CTTAGTATGAACAAAGTCACTGATGAAAGTGCATCTGCAATTGCTTCCTGTATTCATAAT
ATTGAGGAACTGTATCTGGGGTATTCTAAAATGACAAGTGTTGGAATTTGTAAAATTGCA
GAAGCCATTTCCAACCTTACACAACCAATAAAAGTATTTAGCATCTTCGGAACCACAATT
GATGAGAAAGCTGAAAATAGTTTGTTTGGTTGTTTGCACAACATACAAGATACACTTAAT
GTATCAAAATCATGCATAAGTGAAGAGTTTGTATCAAAATACTCAAGATTACCTGAACCA
GTAAGAGAAACATAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[1-220] 3.1E-29
Pfam
Leu-rich_rpt (IPR001611) - T[62-81] 0.0014 - T[116-135] 0.0021

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value