- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S59...' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Moocul.CG.ELv1_2.S73...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S45.g01714.01.t
Possible name(s)
NPHP3; STIP1; TTC28
Gene model
Location
S45 [79,813 / 83,661]
Amino acid sequence
Length: 907
>Phmamm.CG.MTP2014.S45.g01714.01.p
MYGKSSPASVASSHAGSSVDQKVTSTVLNQNEAKLVEQLKALCDETGKEKDPKQTAKILQ
SIGNIYYQRSPDKLCLIQAAALLNAAIVRTEDKTKIETDLQSLHKHILFLAGCKNTDEDL
QKLSKKCFECVNIMRKNANLSLQTLTEKSSAQDEMAKIDYMEQLQGNIANDYTLVMKEIS
LQCIKLLGPAPCKFCLVGIGSLARSEITPYSDFESVIVLDDNVRLVPNYESMVEYFRNYA
MIFQVIVLGFGETIIPSVAVPTLNDFETPGGDWFFDVHTPRGVSFDGFMPHACKSPLGRQ
RETKNKPWKLELIQPVSKMAELLQLDHDIKNGYHLSEILTLIRFVDGEPKLFDDFFDRVQ
NHVQVMSEVQSQMLVRQIKEDLDTFAVFNNLPNVYTNKKINIKRVLYRSTTLFVSTLGRI
HGISSPSSFQILRELEIRGVISQNAKNNLMFAVAIACEVRLKVYMYKKGQDEWLSMDDEN
TGQQENESNIIQTVGLDNILRYFKVAFCLQRSVRSGQQITYHADMQDVGKDVDVAICYYF
KQYKRVIELCEELRQTYLANEDDKPKVAACTSLIANCFFHLEKYESSLFERKKEIGYRAK
DVYSENEQYALAVCRKAAGRCLFKLLRYQDAIEEHLKEKELLNPTSKDFATCLENIGSCY
FQMELYNKALQTFREQFSFQATMFKEVSEEQAECLTNIAGCLFRLEEYQEALDSYIKSKD
IQVDLSKSDSTIADCHCKIAHCYFKLQMVEKALKNYKEEIKLLKIEQDVDQSRLFDAYSN
VAGCCYSLELLSESILYHKLQLELSDNLQGTDKPAIKGRIAHCYMKMQDYDQAQEMYKSE
LADRQKSKNKSVADEALFAKTVENLTFCLLHLGRSQEAVDLFQLHIGNIRQRSESISKFT
LRDTSPM
Nucleotide sequence
Length: 2,724
>Phmamm.CG.MTP2014.S45.g01714.01.t
ATGTATGGAAAGTCATCACCAGCTTCTGTGGCAAGTAGCCATGCTGGATCTTCCGTTGAC
CAAAAAGTGACTTCAACAGTGTTGAATCAGAACGAAGCAAAACTGGTTGAACAGCTAAAG
GCTTTGTGTGATGAAACTGGAAAAGAAAAAGATCCAAAGCAAACAGCCAAAATCCTTCAA
TCAATCGGTAACATTTATTACCAACGGTCACCAGATAAACTTTGCCTCATTCAAGCAGCA
GCATTACTTAACGCAGCTATTGTAAGAACTGAAGACAAAACAAAGATAGAGACAGATTTG
CAAAGCCTACACAAACACATTCTATTTCTTGCTGGATGTAAAAACACAGATGAAGATCTG
CAGAAACTATCTAAAAAGTGTTTTGAATGCGTCAATATAATGAGGAAAAATGCCAACCTT
TCTTTGCAGACCCTGACAGAAAAATCCTCCGCTCAAGACGAAATGGCGAAAATCGACTAC
ATGGAACAGCTTCAAGGTAACATAGCAAATGACTACACTTTGGTAATGAAAGAAATTTCC
CTGCAATGCATTAAGCTTCTCGGTCCTGCTCCATGTAAATTCTGCCTAGTTGGTATTGGA
TCTTTGGCACGAAGTGAAATAACCCCGTACTCTGATTTTGAATCAGTGATTGTTTTGGAC
GATAATGTCAGGCTTGTACCCAACTATGAATCAATGGTGGAATATTTTCGAAATTATGCT
ATGATTTTCCAAGTTATCGTCCTTGGTTTCGGTGAAACTATCATACCAAGTGTTGCAGTT
CCAACGTTAAACGACTTTGAAACACCCGGAGGTGACTGGTTTTTTGATGTACACACTCCG
CGAGGGGTGTCCTTTGATGGGTTTATGCCACACGCGTGCAAATCCCCTCTTGGGCGACAA
AGAGAAACCAAAAACAAACCTTGGAAGTTGGAATTAATACAACCTGTGTCAAAAATGGCC
GAGCTCTTGCAACTGGACCACGATATCAAAAATGGCTACCACCTTTCTGAGATTTTGACA
CTAATCCGTTTTGTAGATGGAGAGCCAAAACTTTTCGATGACTTTTTTGACAGAGTGCAA
AATCACGTGCAAGTCATGAGTGAGGTGCAGTCGCAAATGCTTGTTAGACAAATCAAGGAA
GACTTGGACACATTTGCTGTGTTCAATAACCTTCCAAATGTGTACACGAACAAGAAAATC
AACATCAAACGTGTTCTTTACAGAAGCACAACCCTCTTTGTGTCAACATTGGGTCGCATA
CACGGCATTTCCAGTCCGTCTTCGTTTCAAATCCTAAGAGAGCTCGAAATTCGTGGAGTG
ATCTCGCAGAACGCCAAGAATAATTTGATGTTTGCCGTTGCGATTGCATGCGAAGTGCGA
CTCAAAGTGTACATGTACAAAAAAGGTCAAGATGAATGGTTAAGCATGGATGACGAAAAC
ACAGGTCAACAGGAAAATGAATCAAACATCATCCAAACAGTTGGCCTGGATAATATTCTA
AGGTACTTTAAGGTTGCTTTTTGTCTTCAAAGAAGTGTCCGATCTGGACAGCAAATTACC
TACCATGCCGACATGCAGGATGTTGGAAAAGATGTAGATGTTGCGATTTGCTACTATTTT
AAGCAGTACAAAAGAGTGATAGAACTATGTGAAGAGCTGCGTCAAACGTATCTAGCCAAT
GAAGATGACAAACCTAAGGTTGCAGCCTGTACATCTTTAATTGCAAACTGCTTTTTTCAC
TTGGAAAAATACGAATCATCCTTGTTTGAACGCAAAAAGGAAATTGGTTACAGGGCAAAG
GATGTATACAGCGAAAACGAGCAATATGCTCTGGCTGTTTGTAGAAAAGCAGCAGGTCGA
TGCTTGTTTAAGCTTCTTCGATATCAAGATGCGATAGAGGAGCACTTAAAAGAAAAAGAA
CTTCTTAATCCTACATCAAAAGATTTTGCCACATGCCTTGAAAATATTGGAAGCTGCTAT
TTTCAAATGGAACTCTACAACAAGGCTTTGCAAACATTTCGAGAGCAATTTAGTTTCCAA
GCTACAATGTTCAAAGAAGTAAGTGAAGAACAAGCCGAATGTTTGACCAACATTGCTGGG
TGTTTGTTTCGTTTGGAAGAATACCAGGAAGCATTGGACAGTTACATAAAATCCAAAGAT
ATTCAAGTTGATCTGAGTAAAAGTGACAGCACCATCGCAGACTGCCACTGCAAAATTGCA
CATTGTTACTTTAAACTTCAGATGGTAGAGAAGGCATTGAAAAACTACAAAGAAGAGATA
AAACTTTTAAAAATTGAACAAGATGTTGACCAAAGTCGACTCTTTGATGCTTACTCCAAT
GTGGCCGGCTGTTGTTACTCGCTTGAACTGCTTTCTGAGTCGATTTTGTATCACAAACTG
CAACTGGAACTGTCTGACAACTTACAGGGAACCGACAAACCTGCCATTAAAGGTCGCATC
GCCCACTGCTACATGAAAATGCAGGACTATGATCAAGCACAGGAAATGTACAAAAGTGAA
CTGGCTGATCGGCAGAAATCTAAAAACAAAAGCGTAGCAGATGAAGCTTTGTTTGCAAAA
ACGGTTGAAAACCTTACATTTTGTTTGCTGCACCTTGGACGTTCTCAAGAAGCTGTGGAT
TTATTTCAATTGCATATTGGCAACATACGCCAACGCTCGGAAAGTATCAGCAAGTTTACT
TTGCGAGATACGAGTCCGATGTGA
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[161-242] 5.3E-6 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[534-722] 1.4E-17 - T[725-901] 6.0E-18 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[537-670] 1.26E-7 - T[649-882] 4.43E-18 |
| SMART |
TPR_repeat (IPR019734) - T[650-683] 4.0 - T[692-725] 0.35 - T[733-766] 1.1 - T[775-808] 76.0 - T[814-847] 55.0 - T[859-892] 430.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[650-766] 9.968 - T[814-847] 6.599 |
| Pfam |
TPR_repeat (IPR019734) - T[819-845] 0.028 |
| Protein Name | Identity | Bit Score | e-value |
|---|