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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R489...' > 
  2. Transcript 'KH2012:KH.C2.36.v4.A...' > 
  3. Transcript 'KH2012:KH.C3.195.v1....' > 
  4. Transcript 'KH2012:KH.C2.348.v3....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S456.g08944.02.t

Possible name(s)

VANGL1; VANGL2

Gene model

Phmamm.CG.MTP2014.S456.g08944

Location

S456 [18,767 / 28,408]

Sequences

Amino acid sequence

Length: 561

>Phmamm.CG.MTP2014.S456.g08944.02.p
MDTDRLDNESEYSVNTNRSERSRHRRHRNRDHSKRHRGRGSGIDLDDSAAEKTVTIRTPP
MDGRHVSRADEETIVNMPENEKYMIILISYENSPLFDAFQDDNWGETNTFISGTTDVTQL
SNESLAKLKKDLQSSVGFHDCGFVATILFAFISYVTPIAFVVIPKILGKSFQNDSCGTVC
KGSLIDMAFNLFILLILSWAIFFRQQRTSMPRVFMFRALIMVLVILVTLTYWLYYVVWIL
EENEQDYTSIVAYAGRLTNSLLWLHYLSLALLELRHLQNTFVLEVIRTTDGERKFYSIGD
LSIQRCSVWVLEKYYCDFPVYNPALMRIPSRSSRMKQITSNSFKVYNVDGQPGNDSHGMT
HQAIIAAVARRRDAGHNERYYEEAEYERRIRKRKARLVAATEDAFTHIRRASEQEITKAK
GSESVMDPEGASKAIFPALARSLQKYLRTTRQHQHYDIDGILKHLAFCVKNDMTPKAFLE
KYLHPGPSLTYDPRQDSSQWELVSDEPLVNMLKEGSVFRLNQQNYSLVVTARRLPRVRLQ
EVFVDSSTHRFVLQMQSETSV

Nucleotide sequence

Length: 1,686

>Phmamm.CG.MTP2014.S456.g08944.02.t
ATGGATACTGATCGCCTTGATAATGAATCTGAATATTCTGTCAACACAAACAGATCTGAA
AGGTCACGACACAGAAGACATCGAAACAGAGACCACAGCAAACGACATCGTGGTCGAGGT
AGTGGCATTGACCTTGATGACAGTGCAGCTGAGAAAACTGTAACGATCAGAACTCCTCCA
ATGGATGGAAGACATGTCAGCAGGGCAGATGAAGAAACAATTGTCAACATGCCAGAGAAT
GAAAAATACATGATAATTTTGATTTCATATGAAAATTCTCCATTGTTTGATGCATTTCAG
GATGACAATTGGGGTGAAACCAACACTTTTATATCAGGAACAACAGATGTCACACAGTTG
AGCAATGAGTCACTAGCAAAACTTAAAAAGGATCTACAATCATCTGTAGGATTTCATGAC
TGTGGTTTTGTGGCCACAATACTTTTTGCCTTTATATCATATGTAACACCTATCGCATTT
GTGGTAATACCAAAAATCCTTGGTAAAAGCTTTCAAAATGATTCCTGTGGAACAGTGTGC
AAGGGATCATTAATTGACATGGCATTCAATCTGTTTATCCTGTTAATCCTGTCTTGGGCA
ATTTTCTTCAGACAGCAGCGAACGAGCATGCCCAGAGTTTTTATGTTCAGAGCATTGATC
ATGGTTCTTGTCATACTTGTGACATTGACATATTGGTTGTACTATGTGGTGTGGATTCTT
GAAGAAAATGAACAGGACTACACGTCAATCGTTGCATATGCTGGCAGACTTACCAACAGT
CTACTCTGGTTGCACTATCTCTCATTAGCATTGCTGGAGTTGCGACACTTACAAAATACA
TTTGTTCTTGAAGTAATTCGCACTACTGATGGCGAAAGAAAGTTTTACAGCATTGGGGAC
CTCAGTATTCAACGTTGTTCCGTTTGGGTCCTCGAGAAATACTACTGCGACTTTCCGGTG
TACAATCCCGCTTTGATGAGAATTCCGTCACGCAGTTCACGAATGAAGCAAATCACCAGC
AATTCGTTTAAGGTGTACAACGTTGATGGTCAACCGGGCAACGACTCACACGGAATGACC
CACCAGGCTATCATAGCGGCCGTAGCCAGACGACGAGATGCTGGACATAACGAACGGTAT
TACGAAGAAGCCGAATACGAACGGAGGATTAGGAAAAGAAAAGCCAGGCTAGTGGCCGCT
ACCGAGGATGCTTTTACACACATCCGACGCGCGAGCGAACAGGAGATAACCAAAGCTAAA
GGATCTGAATCTGTAATGGACCCCGAAGGAGCGTCGAAGGCGATATTTCCAGCACTTGCC
CGGTCGTTGCAGAAATACCTCCGCACAACGCGTCAACATCAGCATTACGATATTGACGGA
ATTCTCAAACATTTGGCTTTTTGTGTAAAGAATGATATGACACCCAAAGCCTTCCTTGAA
AAATACTTGCACCCCGGTCCTTCTCTGACGTACGACCCACGTCAGGACTCCTCGCAGTGG
GAGTTGGTCAGCGACGAACCACTTGTCAATATGCTCAAGGAGGGCAGCGTTTTCCGATTG
AACCAGCAGAACTATTCACTTGTGGTAACCGCACGAAGGTTGCCCCGCGTTCGCCTGCAG
GAAGTCTTTGTTGATTCATCGACCCACAGATTTGTGCTGCAGATGCAAAGTGAGACTTCG
GTTTGA

InterProScan

PIRSF
VANGL (IPR009539) - T[6-561] 2.4E-181
PANTHER
VANGL (IPR009539) - T[6-561] 2.0E-195
Pfam
VANGL (IPR009539) - T[21-561] 5.6E-200

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 47.905 % 468 1.53E-160
VANG2_HUMAN 44.718 % 365 1.37E-120