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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S456.g08944.01.t

Possible name(s)

VANGL1; VANGL2

Location

S456 [18,758 / 28,565]

Sequences

Amino acid sequence

Length: 533

>Phmamm.CG.MTP2014.S456.g08944.01.p
VKRMDTDRLDNESEYSVNTNRSERSRHRRHRNRDHSKRHRGRAEKTVTIRTPPMDGRHVS
RADEETIVNMPEDDNWGETNTFISGTTDVTQLSNESLAKLKKDLQSSVGFHDCGFVATIL
FAFISYVTPIAFVVIPKILGKSFQNDSCGTVCKGSLIDMAFNLFILLILSWAIFFRQQRT
SMPRVFMFRALIMVLVILVTLTYWLYYVVWILEENEQDYTSIVAYAGRLTNSLLWLHYLS
LALLELRHLQNTFVLEVIRTTDGERKFYSIGDLSIQRCSVWVLEKYYCDFPVYNPALMRI
PSRSSRMKQITSNSFKVYNVDGQPGNDSHGMTHQAIIAAVARRRDAGHNERYYEEAEYER
RIRKRKARLVAATEDAFTHIRRASEQEITKAKGSESVMDPEGASKAIFPALARSLQKYLR
TTRQHQHYDIDGILKHLAFCVKNDMTPKAFLEKYLHPGPSLTYDPRQDSSQWELVSDEPL
VNMLKEGSVFRLNQQNYSLVVTARRLPRVRLQEVFVDSSTHRFVLQMQSETSV

Nucleotide sequence

Length: 1,759

>Phmamm.CG.MTP2014.S456.g08944.01.t
GTAAAAAGAATGGATACTGATCGCCTTGATAATGAATCTGAATATTCTGTCAACACAAAC
AGATCTGAAAGGTCACGACACAGAAGACATCGAAACAGAGACCACAGCAAACGACATCGT
GGTCGAGCTGAGAAAACTGTAACGATCAGAACTCCTCCAATGGATGGAAGACATGTCAGC
AGGGCAGATGAAGAAACAATTGTCAACATGCCAGAGGATGACAATTGGGGTGAAACCAAC
ACTTTTATATCAGGAACAACAGATGTCACACAGTTGAGCAATGAGTCACTAGCAAAACTT
AAAAAGGATCTACAATCATCTGTAGGATTTCATGACTGTGGTTTTGTGGCCACAATACTT
TTTGCCTTTATATCATATGTAACACCTATCGCATTTGTGGTAATACCAAAAATCCTTGGT
AAAAGCTTTCAAAATGATTCCTGTGGAACAGTGTGCAAGGGATCATTAATTGACATGGCA
TTCAATCTGTTTATCCTGTTAATCCTGTCTTGGGCAATTTTCTTCAGACAGCAGCGAACG
AGCATGCCCAGAGTTTTTATGTTCAGAGCATTGATCATGGTTCTTGTCATACTTGTGACA
TTGACATATTGGTTGTACTATGTGGTGTGGATTCTTGAAGAAAATGAACAGGACTACACG
TCAATCGTTGCATATGCTGGCAGACTTACCAACAGTCTACTCTGGTTGCACTATCTCTCA
TTAGCATTGCTGGAGTTGCGACACTTACAAAATACATTTGTTCTTGAAGTAATTCGCACT
ACTGATGGCGAAAGAAAGTTTTACAGCATTGGGGACCTCAGTATTCAACGTTGTTCCGTT
TGGGTCCTCGAGAAATACTACTGCGACTTTCCGGTGTACAATCCCGCTTTGATGAGAATT
CCGTCACGCAGTTCACGAATGAAGCAAATCACCAGCAATTCGTTTAAGGTGTACAACGTT
GATGGTCAACCGGGCAACGACTCACACGGAATGACCCACCAGGCTATCATAGCGGCCGTA
GCCAGACGACGAGATGCTGGACATAACGAACGGTATTACGAAGAAGCCGAATACGAACGG
AGGATTAGGAAAAGAAAAGCCAGGCTAGTGGCCGCTACCGAGGATGCTTTTACACACATC
CGACGCGCGAGCGAACAGGAGATAACCAAAGCTAAAGGATCTGAATCTGTAATGGACCCC
GAAGGAGCGTCGAAGGCGATATTTCCAGCACTTGCCCGGTCGTTGCAGAAATACCTCCGC
ACAACGCGTCAACATCAGCATTACGATATTGACGGAATTCTCAAACATTTGGCTTTTTGT
GTAAAGAATGATATGACACCCAAAGCCTTCCTTGAAAAATACTTGCACCCCGGTCCTTCT
CTGACGTACGACCCACGTCAGGACTCCTCGCAGTGGGAGTTGGTCAGCGACGAACCACTT
GTCAATATGCTCAAGGAGGGCAGCGTTTTCCGATTGAACCAGCAGAACTATTCACTTGTG
GTAACCGCACGAAGGTTGCCCCGCGTTCGCCTGCAGGAAGTCTTTGTTGATTCATCGACC
CACAGATTTGTGCTGCAGATGCAAAGTGAGACTTCGGTTTGATGCCGTGCCAAAACCGCT
GCCAAAAAGACAATCGCGCGTCGTTGCCCGTAGCAACCGATTTTGCACCGCCAGGTGGTG
CCACGCAGCAGGTGACGAGGTTTCGAGGTCGTTCCGTTGAAATTCGCTCTCTGCTCATGA
GATTTATGTTCATTTAAGG

InterProScan

PIRSF
VANGL (IPR009539) - T[4-533] 6.2E-183
PANTHER
VANGL (IPR009539) - T[10-533] 2.0E-195
Pfam
VANGL (IPR009539) - T[27-533] 4.6E-208

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VANG1_HUMAN 50.193 % 473 3.3E-163
VANG2_HUMAN 47.114 % 379 2.84E-126