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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S447.g08841.01.t

Possible name(s)

GALNT1; GALNT13; POC1B-GALNT4

Gene model

Phmamm.CG.MTP2014.S447.g08841

Location

S447 [22,591 / 28,537]

Sequences

Amino acid sequence

Length: 456

>Phmamm.CG.MTP2014.S447.g08841.01.p
MFKYRPRKFQHCKIILATSLFWFMLDVFFLLNFTDCKTDCEKDNNGGNFLSKRVLPAIEK
AIPKFSFNPNGPGEMGKAVIIPKEKEQEKKEKFKINQFNLMASEMIALNRSLPDVRMEGC
KAKKYPEVLPKTSVVIVFHNEAWSTLLRTVHSIINRSPRHLLEEVILVDDASERDFLGEK
LENYVAKLPVPVHVVRMGKRSGLIRARLKGAAASTGQVITFLDAHCECTTGWLEPLLAEI
AKDSSTVVCPIIDVISDETFEFMVGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPV
RSPTMAGGLFAIDRDYFTKIGTYDAGMDIWGGENLEMSFRIWQCGGTLLIVTCSHVGHVF
RKATPYTFPGGTGQIINKNNRRLAEVWMDSFKNFFYIITPGVLKQEYGDISDRVQLRQNL
QCKPFKWYLENIYPDSQIPGSYESLGEVRTAASFVT

Nucleotide sequence

Length: 1,371

>Phmamm.CG.MTP2014.S447.g08841.01.t
ATGTTCAAATATCGCCCAAGAAAGTTTCAGCACTGTAAGATCATCCTTGCGACATCCCTG
TTTTGGTTTATGCTGGATGTTTTTTTCTTGTTGAATTTCACTGATTGTAAAACGGACTGC
GAGAAAGACAATAATGGTGGCAACTTTCTTTCAAAACGTGTTTTACCAGCAATAGAGAAA
GCCATTCCGAAATTCAGCTTTAATCCCAATGGCCCAGGCGAAATGGGAAAGGCAGTTATT
ATACCCAAAGAAAAAGAACAAGAAAAAAAGGAAAAATTTAAGATCAACCAATTTAATCTC
ATGGCATCCGAAATGATTGCCTTAAATCGCAGTCTTCCTGATGTTAGAATGGAAGGGTGC
AAGGCAAAAAAATACCCAGAAGTTCTTCCAAAAACATCAGTTGTTATTGTTTTCCACAAC
GAGGCATGGTCTACTTTGTTGCGAACTGTACACAGTATTATCAACAGATCACCAAGACAT
TTGTTGGAAGAAGTTATTCTAGTTGATGATGCCAGTGAAAGAGACTTTCTTGGAGAAAAA
TTGGAGAACTATGTTGCAAAACTGCCAGTGCCTGTTCATGTGGTCAGGATGGGCAAGCGA
TCTGGCTTGATTCGAGCAAGGCTAAAGGGAGCTGCTGCCTCTACAGGACAAGTCATCACT
TTTCTTGATGCTCACTGTGAATGCACAACTGGTTGGCTGGAACCACTTTTGGCAGAAATA
GCAAAAGATAGTTCCACAGTTGTCTGTCCTATCATCGATGTAATTAGCGATGAAACATTT
GAGTTCATGGTGGGATCAGACATGACATATGGTGGTTTTAATTGGAAGCTTAACTTCAGG
TGGTACCCTGTTCCACAAAGAGAAATGGATAGAAGAAAAGGAGACAGAACACTACCTGTC
AGGTCGCCAACAATGGCCGGGGGTCTCTTTGCAATTGATCGTGATTACTTTACAAAAATT
GGGACTTATGATGCTGGAATGGATATTTGGGGTGGTGAAAACCTGGAAATGTCTTTCAGG
ATATGGCAATGTGGGGGTACTCTTCTTATTGTCACATGCTCTCATGTTGGACATGTGTTC
CGAAAAGCAACCCCATACACCTTTCCTGGTGGAACCGGGCAAATCATCAACAAAAACAAT
CGACGCTTAGCGGAAGTGTGGATGGATTCATTCAAAAACTTTTTCTACATTATCACACCA
GGTGTTCTTAAGCAAGAATACGGCGACATCAGTGATCGAGTTCAACTACGCCAGAATCTT
CAGTGCAAACCATTCAAGTGGTACCTGGAAAACATATACCCGGATTCCCAAATACCAGGA
AGCTACGAATCCCTGGGGGAGGTAAGGACCGCTGCTTCCTTTGTGACGTAA

InterProScan

Gene3D
Nucleotide-diphossugar_trans (IPR029044) - T[58-441] 1.3E-170
SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[109-435] 3.75E-71
Pfam
Glyco_trans_2-like (IPR001173) - T[133-317] 6.4E-37

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GALT4_HUMAN 51.882 % 392 8.19E-132
GALT1_HUMAN 76.957 % 722 0
GLT13_HUMAN 74.777 % 709 0