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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S438.g08733.02.t

Possible name(s)

ZCCHC24

Location

S438 [64,765 / 67,649]

Sequences

Amino acid sequence

Length: 229

>Phmamm.CG.MTP2014.S438.g08733.02.p
SASVQQPAQLLNWVYLTLQGPTAHSQQTVMSPSSLSTGQYQLSGQESMTNQPTKDAAQMY
SPMFWVPEYLLAPSDIPIPQAGSAETFQSLTPSVGELVDGFAELSLELHRHATRIPPSNY
LCHLCFTKGHFIKDCPHARQKGEGLTPYQGKKRCFGVYKCSKCKRKWMSSNSWANMGQDC
NKCRIVVYPHKQRPLEKPDGLDVSDQSKEHPQHLCEKCKSLGYYCRRIV

Nucleotide sequence

Length: 1,139

>Phmamm.CG.MTP2014.S438.g08733.02.t
CGAGCGCTTCGGTGCAACAGCCGGCGCAGCTGCTGAACTGGGTGTATCTCACGCTGCAAG
GACCGACTGCGCATTCCCAACAGACTGTAATGTCGCCATCTTCGCTTTCCACCGGTCAGT
ACCAACTATCGGGACAAGAATCAATGACAAATCAACCCACAAAAGACGCAGCACAAATGT
ATTCTCCCATGTTCTGGGTTCCGGAATATCTTCTAGCGCCTTCAGACATTCCCATCCCCC
AAGCCGGGTCGGCAGAAACTTTTCAAAGCTTGACGCCGAGTGTCGGCGAACTGGTCGACG
GATTTGCTGAGCTTTCACTCGAGTTACATCGACATGCAACCCGGATACCCCCGTCAAACT
ACCTCTGTCATCTCTGCTTCACCAAGGGACACTTTATCAAGGATTGTCCACACGCTCGCC
AGAAAGGTGAAGGTTTGACGCCGTACCAGGGAAAGAAGCGATGTTTTGGAGTTTACAAAT
GCTCGAAATGCAAACGCAAGTGGATGAGCAGCAACAGTTGGGCCAACATGGGCCAGGACT
GCAACAAATGTCGTATTGTCGTTTACCCACACAAACAAAGACCACTTGAAAAGCCAGATG
GCCTCGACGTATCGGATCAAAGCAAAGAACATCCCCAGCACTTGTGCGAAAAGTGCAAGT
CCCTCGGGTACTACTGTCGCCGTATCGTCTAGAGTCGATCATTACACACATCGCACATAC
GGACGCCGTAAACAACTACACGGTGCTTCAGTAACCGAAGCCATTTGGTTGAAATGTACA
TATGTTGCCTTGAATTATTTCTTAATTTTTTGTTTATCTACTCTACCCCCGATCTTCTTC
AAGCGGTATTCCCGTGCCTTTTGTCTTTTTGTTAGTTTGTACTCCAGCCATCATGCTCGT
ATCACGTGCATACAATTTCATTGCTTCATTTGCGGTACTGTATTATACTTATATGTTTCA
TTTCTAACTCGTATTTTGTATATATTTGAAAACGTTGTAAGATTTAAAATCCTCCCAGCT
AAAGAAACTTCTTTGTATATAGCTCGGTCCTTTGGGAATAAAGTTTATTTAAGAACCACA
GGTAAACTGACCAATATGTAAGTGCCGATTTTTTGCGTTTTTCCATGTCAATAAATACA

InterProScan

SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[113-144] 1.36E-5
Pfam
Zn_knuckle_CX2CX3GHX4C (IPR025829) - T[117-136] 2.3E-10
Pfam
Zcchc24_zf-3CxxC (IPR033446) - T[151-218] 8.5E-25
SMART
Znf-3CxxC (IPR027377) - T[153-221] 2.2E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZCH24_HUMAN 56.087 % 249 6.52E-84