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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S438.g08733.01.t

Possible name(s)

ZCCHC24

Gene model

Phmamm.CG.MTP2014.S438.g08733

Location

S438 [64,740 / 67,202]

Sequences

Amino acid sequence

Length: 246

>Phmamm.CG.MTP2014.S438.g08733.01.p
MSLLSQIDTSASVQQPAQLLNWVYLTLQGPTAHSQQTVMSPSSLSTGQYQLSGQESMTNQ
PTKDAAQMYSPMFWVPEYLLAPSDIPIPQAGSAETFQSLTPSPPPSPFDSVGELVDGFAE
LSLELHRHATRIPPSNYLCHLCFTKGHFIKDCPHARQKGEGLTPYQGKKRCFGVYKCSKC
KRKWMSSNSWANMGQDCNKCRIVVYPHKQRPLEKPDGLDVSDQSKEHPQHLCEKCKSLGY
YCRRIV

Nucleotide sequence

Length: 741

>Phmamm.CG.MTP2014.S438.g08733.01.t
ATGTCGTTGCTTTCCCAAATCGACACGAGCGCTTCGGTGCAACAGCCGGCGCAGCTGCTG
AACTGGGTGTATCTCACGCTGCAAGGACCGACTGCGCATTCCCAACAGACTGTAATGTCG
CCATCTTCGCTTTCCACCGGTCAGTACCAACTATCGGGACAAGAATCAATGACAAATCAA
CCCACAAAAGACGCAGCACAAATGTATTCTCCCATGTTCTGGGTTCCGGAATATCTTCTA
GCGCCTTCAGACATTCCCATCCCCCAAGCCGGGTCGGCAGAAACTTTTCAAAGCTTGACG
CCGAGTCCACCGCCATCTCCATTCGACAGTGTCGGCGAACTGGTCGACGGATTTGCTGAG
CTTTCACTCGAGTTACATCGACATGCAACCCGGATACCCCCGTCAAACTACCTCTGTCAT
CTCTGCTTCACCAAGGGACACTTTATCAAGGATTGTCCACACGCTCGCCAGAAAGGTGAA
GGTTTGACGCCGTACCAGGGAAAGAAGCGATGTTTTGGAGTTTACAAATGCTCGAAATGC
AAACGCAAGTGGATGAGCAGCAACAGTTGGGCCAACATGGGCCAGGACTGCAACAAATGT
CGTATTGTCGTTTACCCACACAAACAAAGACCACTTGAAAAGCCAGATGGCCTCGACGTA
TCGGATCAAAGCAAAGAACATCCCCAGCACTTGTGCGAAAAGTGCAAGTCCCTCGGGTAC
TACTGTCGCCGTATCGTCTAG

InterProScan

SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[130-161] 1.78E-5
Pfam
Zn_knuckle_CX2CX3GHX4C (IPR025829) - T[134-153] 2.5E-10
Pfam
Zcchc24_zf-3CxxC (IPR033446) - T[168-235] 9.8E-25
SMART
Znf-3CxxC (IPR027377) - T[170-238] 2.2E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZCH24_HUMAN 54.887 % 259 9.19E-88