- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S435.g08697.01.t
Possible name(s)
SOX11; SOX12; SOX4
Gene model
Location
S435 [101,047 / 102,571]
Amino acid sequence
Length: 507
>Phmamm.CG.MTP2014.S435.g08697.01.p
MLHHASASTSSAQSMSTVYMSLDSRKRSVKPPGSPDSGMGYDSDLDNDEEVITNRRLSQH
KAMSNLHASSPSPTLECINCPEMQDGGHDVFDGNAAKEHTTPPVEVKREVEATCTNDSKM
AEILAELNNLPDTKIELPPPSISSQKKLAARPDHVKRPMNAFMIWSQIQRRKIMEETPDV
HNAEISRNLGKLWRELPEPEKMPFMIEAERLRLQHMRDHPDYKYKPKKKAKATQVKKAAE
EKEYVKIECAKVPAEPKQAASRASPNAKRARKRKLTSNQTKVAQSPTNIPTEPQSVSKAM
FNPIQVALTPNSNPALQGTGANAVNNPTTVTIKVEPSGASLSTLTSSSVPRKRARTNSES
VVKREEQLSPKIVKGTLIQGGGNRQYIIVSGASDMRPNVQAISSVVSSTSRPGSAPQVHV
QDKESVVCYAQGFVPIAKVHENSISIVNGCVQSTNNNNSSNNATLIKESDVISKNEAQII
SEALGSNCLQNFKVSMCFHFQNEVANG
Nucleotide sequence
Length: 1,524
>Phmamm.CG.MTP2014.S435.g08697.01.t
ATGTTACATCACGCAAGCGCCAGCACATCGAGCGCACAATCGATGTCGACCGTTTATATG
AGCCTGGATTCCCGCAAGCGTTCGGTCAAGCCGCCTGGATCGCCCGACTCGGGTATGGGC
TATGACAGCGACTTAGACAACGACGAGGAAGTGATTACAAACCGAAGGCTGAGTCAACAC
AAGGCTATGAGTAACTTACATGCGTCTTCCCCATCGCCTACATTGGAGTGTATTAACTGT
CCCGAAATGCAAGATGGCGGCCACGACGTTTTTGATGGGAACGCTGCCAAGGAACACACT
ACGCCACCTGTGGAGGTTAAGCGCGAAGTCGAGGCGACCTGCACTAATGATAGCAAGATG
GCTGAGATATTGGCCGAGCTCAATAACCTACCTGACACAAAGATCGAGCTTCCTCCACCA
TCAATCAGCAGCCAGAAAAAGTTGGCAGCCCGCCCTGATCACGTCAAGCGCCCGATGAAC
GCCTTCATGATCTGGTCGCAAATCCAGCGACGCAAGATTATGGAAGAAACACCAGACGTG
CACAACGCGGAAATCAGCAGAAATTTGGGCAAACTTTGGCGCGAACTGCCCGAGCCTGAA
AAAATGCCGTTTATGATCGAGGCTGAACGACTTCGCCTGCAACATATGCGAGACCACCCC
GACTACAAATACAAACCAAAAAAGAAGGCCAAAGCGACACAAGTTAAAAAAGCAGCCGAA
GAGAAGGAATACGTAAAAATTGAATGCGCCAAGGTTCCAGCGGAGCCCAAGCAAGCGGCC
TCGCGGGCAAGCCCTAATGCAAAACGCGCACGCAAACGTAAACTTACCTCAAATCAAACC
AAGGTCGCACAATCTCCCACCAACATTCCCACCGAACCTCAGTCTGTGTCAAAAGCCATG
TTCAATCCGATTCAGGTCGCCCTGACGCCGAACAGCAATCCGGCGCTGCAGGGCACGGGT
GCTAACGCTGTGAACAATCCAACAACCGTCACGATCAAAGTGGAACCGAGTGGAGCAAGC
CTCTCGACCTTGACCTCATCCTCTGTACCGCGCAAACGGGCTCGTACGAACTCGGAATCG
GTAGTAAAGCGTGAAGAACAGCTGAGCCCAAAAATCGTTAAGGGCACTTTAATTCAGGGT
GGGGGCAATCGACAGTATATCATTGTGTCGGGCGCCTCGGACATGCGACCAAATGTACAA
GCCATCAGCAGTGTCGTATCCTCAACCAGCCGGCCTGGGAGCGCACCACAGGTTCACGTC
CAGGACAAAGAGTCGGTGGTTTGCTACGCGCAAGGGTTTGTGCCAATAGCAAAAGTCCAC
GAAAACAGCATCAGTATTGTGAACGGATGCGTGCAATCAACCAACAACAACAACAGTAGC
AACAACGCCACGCTCATAAAGGAGTCGGACGTTATCAGTAAGAACGAGGCGCAAATCATA
TCCGAAGCCTTGGGAAGCAACTGTTTGCAAAATTTTAAGGTAAGCATGTGTTTTCATTTT
CAAAATGAAGTTGCCAATGGGTAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOX11_HUMAN | 69.231 % | 132 | 7.11E-34 |
| SOX4_HUMAN | 68.354 % | 133 | 7.35E-34 |
| SOX12_HUMAN | 63.855 % | 125 | 1.82E-32 |