- Transcript 'Moocul.CG.ELv1_2.S41...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C9.362.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S433.g08672.01.t
Possible name(s)
DLL1; NOTCH1
Gene model
Location
S433 [91,548 / 99,926]
Amino acid sequence
Length: 476
>Phmamm.CG.MTP2014.S433.g08672.01.p
MENAMNIPKAIIVLVYGEHGEKLATKVRYVRGYNDVGMYNSSINSTTAIFLYPSCMAKKP
TKIKIPAISYHLSEVVGAEVAEIYLWGFLVKAWRNNRRENPELEYFQIDWKALFDTLNHT
NNPCQNGGTCQNIENGTRCLCPDLTTGQFCETRPAFQSSFHVRGLKGPPYEITVDVVYDR
CLKEVPKSVNASIADIILYTNRFTITILEVHLWGFKALVVRTGRHYGLWGQTHAEFAYTA
AFGTREFEDSPCVQGRCENKVNFGRVCICNPGYSGELCNIALVHCYPHPCNTGQCTEIPN
TYNCTCPKGTEGSNCEIDSINKLEKPCVNATRCINSIDGPRCQCMPGYGGNLCDKRTVSG
ENDYRYSSARNNITIAYKSCKAVKATKVDVLLSENFSDFVDAETTQIYLWGFEVNLPNKS
NSNNDIVFSTTVRWKAYFDPRYFDDSPCWNNAQCRNTQGGFVCHCPRRYTGQLCEV
Nucleotide sequence
Length: 2,169
>Phmamm.CG.MTP2014.S433.g08672.01.t
ATGGAAAATGCAATGAACATTCCAAAGGCTATAATTGTTCTTGTGTATGGGGAACATGGG
GAAAAACTTGCGACAAAAGTACGTTATGTGAGAGGTTACAATGATGTCGGGATGTACAAT
TCATCTATCAACTCCACGACTGCTATTTTTCTTTACCCTTCGTGTATGGCGAAGAAACCA
ACAAAAATAAAAATACCAGCAATCAGCTATCATTTATCGGAGGTTGTTGGTGCTGAAGTA
GCGGAAATATATCTTTGGGGATTTCTCGTAAAAGCCTGGAGAAACAACAGAAGAGAAAAT
CCTGAGTTAGAATATTTTCAGATTGATTGGAAGGCGCTTTTCGATACGCTAAACCACACA
AATAATCCCTGTCAAAATGGAGGAACTTGCCAAAACATTGAAAACGGAACAAGATGCTTG
TGTCCGGACTTGACCACTGGGCAGTTTTGTGAGACACGGCCAGCATTTCAATCTAGCTTT
CACGTTCGTGGACTTAAAGGCCCTCCATATGAAATCACCGTCGACGTTGTCTACGATCGT
TGTCTTAAAGAGGTTCCTAAATCCGTCAATGCCAGCATTGCAGATATTATTTTATACACA
AATAGGTTTACCATCACGATTCTTGAGGTTCATCTTTGGGGATTTAAAGCACTTGTCGTG
AGGACGGGACGCCACTATGGACTCTGGGGACAAACTCATGCGGAATTTGCTTATACAGCG
GCTTTCGGTACTCGAGAGTTTGAGGACTCGCCATGTGTGCAAGGCCGGTGTGAGAACAAA
GTAAATTTTGGAAGAGTGTGTATCTGCAATCCTGGCTACTCTGGGGAATTATGTAATATA
GCTCTGGTTCATTGTTATCCCCACCCTTGCAACACGGGCCAATGCACCGAGATTCCCAAC
ACTTACAACTGTACTTGCCCAAAAGGCACAGAAGGGTCTAATTGCGAAATAGATTCAATC
AATAAGTTGGAAAAACCATGTGTAAATGCTACTAGATGCATCAATAGCATCGATGGTCCT
CGTTGCCAATGTATGCCTGGTTATGGGGGAAATTTGTGCGACAAACGGACTGTCTCTGGG
GAAAATGATTACAGATACTCATCTGCACGTAACAATATCACTATAGCATACAAGAGTTGC
AAAGCAGTGAAAGCTACTAAGGTCGACGTTTTGTTAAGTGAAAACTTTTCCGATTTTGTG
GATGCTGAAACTACTCAGATATATTTGTGGGGATTTGAAGTAAATTTGCCAAACAAGTCT
AACAGCAACAATGATATTGTATTCAGTACAACAGTTAGATGGAAAGCATATTTTGATCCT
AGGTACTTTGATGACAGTCCGTGCTGGAATAATGCACAGTGTAGAAATACACAAGGTGGA
TTTGTTTGCCATTGTCCCAGAAGATACACCGGACAACTTTGTGAAGTTTGATTTAACATT
TATGTCATTCGATTTTCTATATTGAAGTTGTTCCTGACTGTGCATCCAATCCCTGTAAAA
ACAACGGAACGTGTGTCGACACCCAGTGGTCATACAAATGCCTCTGCAGCGAAAGATTCA
GGGGGCTTCATTGCGAAGTCGGACTTCAATTTTGCTTTCCTTCGCCCTGTTATCGTGGAA
AATGCATCGAGAACGAAACCAGCTACCGATGTCAGTGTCCTGAAGGAAATTCGTACCGGT
GGTTTCATTGCGTCCCTTACCAGACGCAGTAATCCTACAATCAAGTGGGATCTGATTGAA
GTTGTTGATTGGAAAGCATATTTTGGTATTTTTGTTGTAATGACAGAGCTGCCTTATTGC
AATACACAACCATGCAAAAATGGGGGAACGTGTGTGGATACAGAGAATTACTACAGGTGC
CAGTGTGTAGAAGGACTTGAGGGTCTTAACTGTGAAAAAGGTTATGTGCAGGGCGTCCGT
CATTTCGAAGCCGAACGATCGCATGTTTCATGGGTACATCATTTGTTTCTTTTCGACGAA
TGCTACAACCAACAACCAACTAGAGTTACAACAGAACTAACCAACCTGGGAAACTTTCCA
AGAGACTACGACGTAGAACTTATGAATGTGTACAGAAATGGATTTAAAATTGCTGTGCGT
CGGACATATTACGCAAGGGGCAGATATTATGATCAACTTTCGATGCAGTTTACAGCCCAC
TTTGGTTAG
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[116-151] 16.276 - T[248-279] 10.09 - T[311-354] 13.549 - T[439-475] 14.784 |
| SMART |
EGF-like_dom (IPR000742) - T[116-151] 1.3 - T[251-279] 9.8 - T[284-316] 1.6 - T[322-354] 1.0 - T[445-475] 7.1 |
| Pfam |
EGF-like_dom (IPR000742) - T[122-146] 1.5E-4 - T[446-471] 1.4E-4 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[123-151] 0.13 - T[285-316] 0.19 - T[326-354] 0.06 - T[447-475] 0.0052 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[139-150] . - T[267-278] . - T[267-278] . - T[342-353] . - T[342-353] . - T[463-474] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[249-355] 7.22E-9 |
| Pfam |
EGF-like_CS (IPR013032) - T[252-273] 0.077 - T[327-348] 2.9E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[454-465] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOTC1_HUMAN | 25.824 % | 87.8 | 4.18E-18 |
| NOTC4_HUMAN | 27.105 % | 84.7 | 3.56E-17 |
| DLL1_HUMAN | 31.78 % | 91.3 | 2.06E-19 |