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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S927.1.v3....' > 
  2. Transcript 'Boleac.CG.SB_v3.S341...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  4. Transcript 'Moocci.CG.ELv1_2.S65...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S42.g01624.01.t

Possible name(s)

ITGAD; ITGAM; ITGAX

Gene model

Phmamm.CG.MTP2014.S42.g01624

Location

S42 [123,194 / 127,905]

Sequences

Amino acid sequence

Length: 390

>Phmamm.CG.MTP2014.S42.g01624.01.p
MQMGHYYVTLVVMSLLLVGEVRGLNLFMSDETIVGPKTSNKSNYFGYKFKMFTGIDNRPF
TMFVGAPHAGGDGKSHNYPGAMFMCVRGPNSQISCNDSTPGAKGSPGNPPVLSDDAAVGL
NLAGRNIGKRSELSVCAPRRMLNCSTNYVTNGVCYRYRKGAWLRSTRQANRFCPMKHIDI
VVVLDGSRSIRDADFVQVKQWVKLLSSKFSSDTTSIGVVQYSHFYDRKVPLRLWTKPIYW
RRQPYVKEEIAIGQYPNRTEFNVIASDKSKILTLNTFNKLDSIVGALQKSISGFLEGSGE
TNQTNELYQAETGLSSVYSKVSVMNGLVDVFWWFGMCNDPTESQPNCSNTDNEPTTDLPT
IVVVTNSAHKLPKLPDSTYYDETLLSMTER

Nucleotide sequence

Length: 1,173

>Phmamm.CG.MTP2014.S42.g01624.01.t
ATGCAAATGGGGCATTATTACGTCACACTCGTGGTGATGTCGCTTCTGTTGGTCGGGGAA
GTTCGAGGTTTAAATTTGTTCATGAGCGATGAAACGATTGTGGGACCGAAAACTTCGAAC
AAGTCCAATTATTTTGGTTACAAGTTTAAAATGTTCACAGGGATCGACAACCGACCATTC
ACAATGTTTGTTGGAGCCCCACATGCAGGGGGTGACGGGAAATCCCACAATTATCCCGGC
GCAATGTTCATGTGCGTCCGGGGTCCGAACTCCCAAATCAGCTGCAACGATTCGACTCCG
GGGGCTAAGGGGTCTCCGGGAAATCCCCCTGTATTAAGCGATGACGCAGCTGTGGGTTTG
AACTTGGCCGGAAGGAATATCGGAAAGAGGAGCGAGTTGTCGGTTTGTGCCCCGCGCCGG
ATGTTGAATTGTTCAACGAACTACGTCACAAACGGTGTTTGTTACAGATACAGGAAAGGC
GCGTGGTTGAGATCGACGCGTCAAGCAAACAGATTTTGTCCGATGAAACACATCGACATT
GTGGTGGTATTGGACGGTTCCAGATCAATCCGAGACGCTGACTTCGTGCAAGTCAAGCAA
TGGGTTAAACTTCTTTCATCCAAATTCTCCTCCGACACAACTAGTATAGGTGTTGTGCAG
TATTCGCATTTCTACGATAGAAAAGTTCCTCTGCGACTTTGGACAAAACCTATTTACTGG
CGCCGCCAACCCTATGTTAAAGAGGAAATTGCGATCGGCCAATACCCGAACAGAACGGAG
TTTAATGTGATCGCTTCCGACAAAAGTAAAATTCTTACTCTGAACACTTTCAACAAACTC
GACTCGATCGTGGGAGCTCTGCAAAAATCAATATCCGGATTTCTAGAAGGAAGCGGTGAA
ACGAACCAGACAAACGAGCTCTATCAAGCCGAAACCGGACTTTCAAGCGTTTACTCCAAA
GTAAGTGTAATGAATGGTTTGGTGGACGTCTTCTGGTGGTTCGGAATGTGCAACGATCCA
ACTGAATCCCAACCCAACTGTTCAAACACCGACAACGAGCCAACAACAGATCTTCCAACA
ATCGTTGTCGTCACAAATTCAGCGCACAAGCTTCCGAAACTACCAGATTCGACCTACTAT
GACGAAACACTGCTTTCCATGACGGAAAGATGA

InterProScan

Gene3D
Integrin_alpha_N (IPR028994) - T[39-173] 9.0E-28
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[173-291] 5.4E-15
Gene3D
vWFA_dom_sf (IPR036465) - T[174-229] 9.0E-28
ProSiteProfiles
VWF_A (IPR002035) - T[179-222] 9.725
Pfam
VWF_A (IPR002035) - T[179-232] 3.8E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value