- Transcript 'KH2012:KH.C13.18.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S422.g08557.01.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
S422 [85,420 / 91,304]
Amino acid sequence
Length: 471
>Phmamm.CG.MTP2014.S422.g08557.01.p
KHLVLEAADGFLFVTACDSSQVVYVSDTVTAVLNQAHAEWNGHLLYDLIHPDDVGKVREQ
LCISESQNSGRVLDLKTGTVKKEGQQSSVRMCMGSRRAFICRMRVGKHQMNMARPRYMRA
QNTLGQPEDGKDSYVVMHVTGFIRAWPPAGYGSEADAMEEVSLAAGNNSGNYCLVAVARL
QITSHPGVGEISSSQEATEFVSRHGRDGAFTFVDLRVTGVLGYQPQDLLTKMPSDFYHPE
DIEHMKESFKQVLLLKGQVLTMSYRFRAQSGEYAWLRTSSFSFQNPYNNEVEYVVCTNTL
VKQPGSDQHQVEVPNAAVPAEIKSMPTYAHTPTEQSPQVMQQYPMAQVAVKSPVTEMDYS
PQQQFNSPTQAGWNHGAAVPATVSPYQPQPTVSERFAPNLGAQHNAGSVPYSSGSYQTTP
PVMYPVSAAHHPIRDAYQQQEAMATMMEPGAAAYTQADYNNLGMYSSYSES
Nucleotide sequence
Length: 2,325
>Phmamm.CG.MTP2014.S422.g08557.01.t
CAAGCATCTGGTTCTTGAAGCTGCTGATGGATTCCTATTTGTTACTGCTTGTGATTCCAG
TCAAGTTGTCTATGTTTCAGACACTGTGACTGCGGTGCTTAATCAGGCACATGCCGAATG
GAATGGTCACCTTTTATATGATCTCATTCATCCCGATGATGTTGGAAAAGTCAGAGAGCA
ACTATGCATTTCTGAATCGCAAAATTCAGGCCGGGTTTTGGATTTGAAGACAGGGACAGT
GAAAAAAGAAGGTCAGCAAAGCTCTGTGCGGATGTGCATGGGGTCAAGAAGAGCTTTTAT
ATGCAGAATGAGAGTTGGCAAACATCAGATGAACATGGCACGACCAAGATATATGAGAGC
ACAAAATACCCTTGGACAACCAGAAGATGGGAAGGACTCTTATGTGGTGATGCATGTAAC
TGGTTTTATACGTGCTTGGCCACCTGCAGGTTACGGTTCAGAAGCAGATGCAATGGAAGA
AGTTTCACTTGCGGCAGGAAATAACTCTGGCAACTATTGCCTTGTTGCTGTAGCAAGACT
TCAGATCACAAGCCACCCAGGTGTTGGTGAGATCAGTTCATCCCAAGAAGCTACAGAGTT
TGTTTCCAGACATGGCAGGGATGGAGCTTTTACATTTGTAGATCTTCGTGTCACTGGAGT
ACTTGGTTATCAGCCACAGGATCTTTTGACCAAAATGCCTTCTGATTTTTACCACCCAGA
GGATATTGAACACATGAAAGAGAGTTTTAAACAAGTATTGCTGCTTAAGGGACAGGTATT
GACCATGTCCTACAGATTCCGTGCCCAATCAGGGGAATATGCTTGGCTGAGAACTAGTTC
ATTTTCCTTTCAAAATCCTTACAACAATGAAGTAGAATATGTTGTGTGCACCAATACCCT
AGTCAAGCAACCTGGTTCAGACCAACATCAAGTTGAGGTTCCAAATGCTGCTGTTCCTGC
TGAGATCAAGTCTATGCCAACTTATGCCCATACTCCCACTGAGCAATCACCCCAGGTCAT
GCAGCAATATCCAATGGCCCAAGTTGCAGTAAAGAGCCCAGTTACTGAAATGGACTACTC
TCCACAACAGCAGTTTAACTCACCGACTCAAGCTGGCTGGAACCATGGGGCAGCCGTTCC
AGCGACAGTCAGCCCATATCAACCTCAACCAACAGTTTCTGAGCGATTTGCACCTAATTT
AGGTGCACAACACAATGCTGGATCAGTTCCATACAGTTCCGGTTCATACCAGACCACTCC
TCCAGTGATGTATCCTGTAAGTGCTGCTCACCACCCTATTAGGGATGCTTACCAACAGCA
GGAAGCCATGGCAACTATGATGGAACCAGGAGCAGCTGCTTACACCCAAGCTGATTACAA
CAATCTTGGAATGTATTCTTCCTACTCTGAATCTTGAAGTGATTGACCAAACATTTTGTG
TGCAGTTTTTACATTGGCCTTTTTTGTATGTTGTGTTATTGCAGATTCTGGGTGTGAACA
ACAGCACTTGGTCTTTTTGTCACAGTTCTGCATGCCTTAAATGTTGTTATTGGCAAGTTT
GTCAGCCTGGTATTGAGATTTCAATGGTTCCCAAACATACAAGAATTTTTAATTAAGCAA
TGTCCCATTTTAAACATACCAATTTTTCCTTCTATACAGGCCTAATACCAGCATTTGTGT
TGGAAACTTGCCAAAATTGTATTTTTAGTGAATATTTTTATTTTAATGCCTTGGCACTAT
CCAGACTAGTACATATTTTCTGTTGACAATTAAATTTTCGTTTTGAACTTTTCCCCTTTT
CTTGCACAAGCGTTTTTTTGTTTTTGTATATTTTGCCCCTTGCTTTTTAACCACATCTGC
TTTTGTTGGTGGCATTTTCCACATACTGTGTCATCCACTATTTCACTGCTGTTGCCTAAA
ACTACAGGCCACCTTGGTAAAATTCCAACACCCAAACATTATGTTTAATCTGGAACAGTT
TTAGTTTTAAAATGGGAAGAATGCATTGAGTGGGTCTGTAGTTTAAGGTCGTCTTTCTAC
CTGTACATACCAACACTAACAAAAGCGTTTTACAGTTTTTTGTTTTGCTTTTAATATGCT
GTTTCTGTTTTAAAGGAAACTATTGTGTGTAAACTGAGCAGTTCCTGTATGTGTGTAATT
TTATCTCTCGAGTGAATAATTAATCATATGTTGCCAAACTGGGTTTTGTTTTGGGATTTT
TTTATTGTTGTTGTTTACCAACACTTTGTTGCAATTATGTGTATGTGCATTTCATGGGGA
AACAGTGGTGTTTCAAAATGTAACCTACTTATGTGAATAAATACC
| ProSiteProfiles |
PAS (IPR000014) - T[1-70] 11.134 - T[207-256] 12.486 |
| SMART |
PAS (IPR000014) - T[2-66] 0.057 - T[187-254] 3.6E-4 |
| Pfam |
PAS_fold (IPR013767) - T[4-104] 1.0E-7 |
| CDD |
PAS (IPR000014) - T[8-97] 3.3317E-7 - T[197-295] 3.25768E-14 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[9-136] 4.05E-10 - T[199-300] 8.1E-26 |
| PRINTS |
Nuc_translocat (IPR001067) - T[15-34] 7.0E-38 - T[47-65] 7.0E-38 - T[93-106] 7.0E-38 - T[134-153] 7.0E-38 - T[199-216] 7.0E-38 |
| TIGRFAM |
PAS (IPR000014) - T[204-295] 7.3E-8 |
| SMART |
PAC (IPR001610) - T[261-304] 1.7E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 55.7 % | 365 | 1.46E-118 |
| ARNT2_HUMAN | 55.66 % | 361 | 7.05E-118 |
| BMAL1_HUMAN | 38.033 % | 231 | 5.52E-69 |