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  1. Transcript 'KH2012:KH.C4.587.v1....'
  2. Transcript 'KH2012:KH.C8.551.v3....'
  3. Transcript 'KH2012:KH.S765.3.v1....'
  4. Transcript 'KH2012:KH.C1.216.v3....'
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S420.g08524.01.t

Possible name(s)

SNX2; SNX30; SNX4

Location

S420 [82,071 / 84,174]

Sequences

Amino acid sequence

Length: 438

>Phmamm.CG.MTP2014.S420.g08524.01.p
MSSSEDNDLFDEEGIEIPTPVTSKGDDPLPNSDTMLNKLKITVSDPEKRTQATGLKMQET
FVVYMIETTPLDAKSSVYESVTSLWRRYSEFELLRNYLLAMYPSVIIPPLPEKRANFIWN
KLTAVDTFDVEFLDRRRGGLESFLHRLAGHHKLSSDRIVKHFILKEDGWRDVVMATDYQA
MSDSWLRKVNASLRVKQPDIRFDQLKSYANQLQTALSNLLRVRAKLAERVFGIYQIHGNY
DRVFKEWALLESEPLHSALQKAASEIEILGKSIDTLIDEEDILAENLKEYLYFADSLKAL
CKRHEALQYDVEWYDNQVHHLRAEKKQALTGKMNTFSFSGMKARLMGADREEQLENKIEQ
LDKSITESDENLDKSKAAAKEFLDSALQEIDLFKARKTMDLKEILTNYAILQIKVNKEGV
ALWRKIKVPFADLIQMPS

Nucleotide sequence

Length: 1,317

>Phmamm.CG.MTP2014.S420.g08524.01.t
ATGAGTAGCTCTGAAGATAATGATCTTTTTGATGAAGAGGGCATTGAAATTCCAACTCCA
GTTACAAGCAAGGGCGATGATCCTTTACCTAACTCCGACACAATGTTAAATAAACTAAAA
ATAACTGTCAGTGATCCTGAGAAAAGAACCCAAGCTACTGGTCTCAAGATGCAGGAAACC
TTTGTGGTTTATATGATCGAAACAACACCTCTTGATGCCAAAAGTTCGGTGTATGAGTCA
GTTACTTCATTGTGGCGAAGATATAGTGAATTTGAGTTGTTACGTAACTATCTACTAGCG
ATGTACCCATCGGTTATCATTCCACCTCTGCCTGAAAAGAGAGCCAACTTTATATGGAAT
AAGCTTACAGCTGTCGACACTTTTGATGTGGAATTTCTTGATCGTCGCCGAGGTGGTTTG
GAGTCATTTCTTCACCGACTTGCTGGTCACCATAAGCTCAGCAGTGACCGAATCGTCAAG
CACTTCATCCTGAAGGAAGATGGATGGAGGGATGTTGTTATGGCAACTGACTATCAGGCA
ATGTCAGATTCGTGGTTGAGGAAAGTGAATGCTTCGCTTCGTGTAAAGCAACCGGACATA
AGGTTTGATCAGCTGAAATCGTATGCAAATCAGTTGCAAACAGCTTTGTCCAATTTGCTA
CGTGTTCGGGCAAAACTTGCTGAAAGAGTGTTTGGAATTTACCAGATCCATGGCAACTAT
GATCGAGTTTTCAAAGAATGGGCTTTGCTCGAATCAGAGCCTTTGCACAGTGCATTGCAA
AAAGCTGCAAGTGAAATTGAAATTCTTGGCAAATCAATTGACACTTTGATTGATGAAGAA
GACATACTTGCTGAAAATTTAAAGGAGTACCTTTACTTTGCTGATTCCTTAAAGGCTTTG
TGCAAGCGTCATGAGGCACTCCAGTACGATGTTGAGTGGTATGACAACCAAGTCCATCAT
TTACGAGCAGAGAAGAAGCAAGCATTGACAGGCAAGATGAACACCTTCTCATTCAGCGGC
ATGAAAGCCAGATTGATGGGCGCAGACCGAGAGGAACAACTTGAAAACAAGATTGAGCAA
CTTGACAAGAGCATCACAGAATCAGATGAAAATCTTGACAAAAGCAAGGCTGCTGCGAAG
GAGTTTCTTGATAGTGCACTGCAGGAGATTGATTTGTTTAAAGCTCGCAAGACAATGGAT
CTTAAGGAGATCCTTACCAATTATGCCATTTTGCAGATCAAAGTGAATAAAGAGGGTGTT
GCTTTATGGCGCAAAATTAAAGTTCCATTTGCAGACCTAATTCAAATGCCGTCTTAA

InterProScan

PANTHER
SNX4 (IPR034783) - T[31-422] 1.7E-112
Gene3D
PX_dom_sf (IPR036871) - T[32-191] 5.8E-30
SMART
Phox (IPR001683) - T[37-166] 2.0E-17
SUPERFAMILY
PX_dom_sf (IPR036871) - T[38-166] 6.15E-24
Pfam
Phox (IPR001683) - T[40-163] 9.7E-19
ProSiteProfiles
Phox (IPR001683) - T[42-170] 16.179
Gene3D
AH/BAR_dom_sf (IPR027267) - T[193-428] 1.6E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX30_HUMAN 25.625 % 85.9 3.95E-18
SNX4_HUMAN 42.336 % 369 1.35E-124