- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S41.g01593.01.t
Possible name(s)
ALOX12B; ALOX5
Gene model
Location
S41 [227,315 / 233,920]
Amino acid sequence
Length: 644
>Phmamm.CG.MTP2014.S41.g01593.01.p
MTTCYRISLSTSDATKKAGTYSKVYLQMVGEEGATTDWLKLDKFFHSDFQPGKIDVYNFK
CEDVGLPVIIRFKLSSWYGRDEWMCNFVKVEYGVETAAFPIYDWITTTIDVARGEGQLPQ
NVTSTKVKKLRKEEIDENFKKFEWVSKPKEGDCGWGLPRYVKGATRDQLPRIFQQDTIKA
THFTSSVFTGVTNSIFGGIQTIASPINELKDYHCLYNDKSTSRNDPIDLDDWYSDHSTGR
QTLNGIAPHSFKRCTSLPKNCDIINSDVDTILGKGKTLEDEMKAGKIYISDFSEVFNGVE
RMNHYIKWGPLYCAESIGLFYVNDKDEFLPLAIQLVPGSRDHIFTPNGSEDDWLLAKMYF
RCSQSNMHEWIYHYLETHASMEPFGVALFRCLPRAHPIYKLLRPHLRTVSTINNDARITL
LPSSAIPAKGISIKAYPLIKEVYKTFNIEKLHIPKLLKKFGTDDAELLPDYYYRDDALDQ
WKIMEKYSSACIRHYYTSDEDVVKDYELQLWAKEVASEGLGWYGNDTKGMPENLTSVDQL
IEICVILMFTSSVQHAAVNFGQFETYKFVPNSPIAMRLPPHKKGEVYLGQFPERLFTEQK
IIDFQQNYRSDLQALEAKIKARNSKLKYPYTFLLPSRVPNSIAI
Nucleotide sequence
Length: 1,935
>Phmamm.CG.MTP2014.S41.g01593.01.t
ATGACAACCTGTTACAGAATTTCATTGTCGACTTCTGATGCCACCAAGAAGGCTGGCACA
TATTCCAAGGTGTATCTTCAGATGGTTGGTGAGGAGGGCGCCACCACCGACTGGCTAAAA
CTGGATAAATTTTTCCACTCCGATTTTCAGCCTGGAAAAATTGATGTCTACAATTTTAAG
TGCGAAGACGTCGGTCTTCCGGTTATCATTCGGTTCAAGCTGTCATCTTGGTATGGTAGA
GATGAATGGATGTGTAACTTTGTTAAAGTGGAATATGGTGTTGAAACTGCAGCGTTCCCT
ATCTATGATTGGATTACAACCACAATCGATGTGGCTAGAGGAGAGGGTCAACTCCCGCAA
AACGTCACCAGCACGAAGGTGAAGAAACTTCGCAAAGAAGAGATAGATGAAAATTTCAAG
AAATTCGAGTGGGTTTCAAAACCAAAGGAGGGTGACTGCGGTTGGGGACTTCCCCGTTAC
GTCAAAGGTGCCACACGTGATCAGCTCCCGAGAATCTTTCAACAGGACACAATAAAGGCC
ACTCACTTTACGAGCAGCGTTTTCACAGGAGTCACTAATTCTATATTCGGTGGCATCCAA
ACAATTGCGTCACCGATCAACGAGTTAAAGGATTACCACTGTCTGTACAATGACAAGTCA
ACGTCACGCAACGATCCAATTGATTTGGACGATTGGTATTCGGATCATAGCACTGGTAGA
CAAACGTTAAACGGAATCGCTCCCCACTCCTTCAAACGTTGCACGTCACTGCCCAAAAAC
TGTGACATCATCAATAGTGACGTAGATACGATTCTTGGAAAAGGCAAAACGCTGGAAGAT
GAAATGAAGGCCGGTAAAATCTACATATCTGACTTCTCTGAAGTTTTTAACGGTGTCGAA
AGAATGAATCATTACATAAAATGGGGACCACTTTATTGTGCCGAGAGCATTGGTCTCTTT
TACGTCAACGACAAAGATGAATTTCTGCCCTTGGCAATTCAACTGGTTCCTGGTAGCAGG
GATCACATTTTTACGCCCAACGGCAGTGAGGATGATTGGCTGCTTGCCAAGATGTACTTT
CGATGTTCACAGAGCAACATGCACGAGTGGATCTATCACTATCTGGAAACGCACGCTTCT
ATGGAACCTTTTGGTGTGGCGCTGTTCCGTTGTTTGCCACGTGCTCATCCGATTTACAAA
CTACTGCGCCCCCACCTTCGCACAGTTTCGACCATCAACAACGACGCAAGAATTACGCTC
TTGCCCTCCTCCGCAATTCCAGCCAAGGGGATTTCCATAAAGGCGTATCCACTGATCAAG
GAAGTTTACAAAACGTTCAACATCGAGAAACTTCACATTCCAAAGTTGCTCAAAAAATTC
GGGACGGACGATGCAGAACTTCTGCCCGACTACTATTACCGAGACGATGCACTAGACCAG
TGGAAGATCATGGAGAAATACTCCAGTGCATGCATCCGTCACTACTACACGAGTGACGAG
GATGTTGTGAAAGACTATGAGCTGCAGCTTTGGGCAAAAGAAGTCGCCAGCGAGGGACTA
GGTTGGTATGGCAACGACACAAAGGGAATGCCAGAAAACCTGACTTCGGTCGATCAACTG
ATTGAAATTTGTGTCATTTTGATGTTCACAAGTTCTGTGCAACACGCTGCCGTCAATTTT
GGTCAGTTCGAGACTTACAAGTTTGTTCCAAACTCGCCGATTGCTATGCGTCTGCCTCCA
CACAAAAAGGGAGAGGTTTACTTGGGACAATTTCCGGAGCGTCTCTTCACTGAGCAGAAG
ATCATAGACTTTCAACAGAATTACAGGAGCGATCTACAAGCGCTCGAAGCTAAGATAAAA
GCTCGCAACAGCAAACTGAAGTACCCATACACCTTTCTACTGCCATCCAGGGTGCCAAAC
AGCATTGCTATTTAA
| SMART |
PLAT/LH2_dom (IPR001024) - T[3-115] 9.1E-5 |
| ProSiteProfiles |
PLAT/LH2_dom (IPR001024) - T[3-119] 17.584 |
| SUPERFAMILY |
PLAT/LH2_dom_sf (IPR036392) - T[4-109] 2.47E-13 |
| Pfam |
PLAT/LH2_dom (IPR001024) - T[5-108] 3.3E-12 |
| PANTHER |
LipOase (IPR000907) - T[5-581] 1.9E-134 - T[583-643] 1.9E-134 |
| ProSiteProfiles |
LipOase_C (IPR013819) - T[117-644] 90.918 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[124-644] 1.1E-118 |
| Pfam |
LipOase_C (IPR013819) - T[231-577] 3.3E-54 |
| PRINTS |
LipOase_C (IPR013819) - T[350-367] 6.1E-11 - T[368-385] 6.1E-11 - T[388-408] 6.1E-11 |
| ProSitePatterns |
LipOase_Fe_BS (IPR020833) - T[368-382] . |
| ProSitePatterns |
LipOase_CS (IPR020834) - T[395-405] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOX5_HUMAN | 30.267 % | 321 | 1.23E-100 |
| LX12B_HUMAN | 30.282 % | 274 | 1.55E-82 |
| LOX12_HUMAN | 27.616 % | 251 | 2.12E-74 |