- Transcript 'KH2012:KH.C1.1056.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S409.g08391.02.t
Possible name(s)
SNX13; SNX14; SNX25
Gene model
Location
S409 [52,928 / 75,033]
Amino acid sequence
Length: 913
>Phmamm.CG.MTP2014.S409.g08391.02.p
MAIEFFSSWDIQITAIDYAQRELKADQRLTGSSNIDEKIHECVEYLLRDYVKYWYNDLSD
DPELLHYFRVSLHDVIRAFAMRCKVIDWQPYLTTNLVDDFASHVKLFRKAQDKMQKLQAN
DQGDDRADTASVNSIPTSMNKNFSNANDNASQEEIPKIEDLFFDNEVSLEKICRELISCD
VKKQCEYLQDVCEVLLYLLLPEDDFHCRPLKYLLREIMIQGIFLPMFKLYSDPDYLNLYV
NWLVSDNCVSSEWFLSVLRRSSILGELHAVREKAEEEINKIRSKDTVGDDITVKQQLSSM
RYVKTFCERKIHQQHEGNVYVDGGDLYLEGLQPEQRNKLYNLPLSVILRNNVALQIFIEY
MQSVNGQAYLFFWLTVDGYRASAEQQLNEVKIQQLQGTVQGRPDMEMLRMIGRNIYDQYL
SKHAQPRVPLDQTIDRQLQKKLESSEPSPYLFDDIQQKVFIIMQKDENFYPAFKQSTLYM
KLLAELDLLREPSFTSADTNGSASGSSMDELAINENEEPIKLTALITQTGICREHGKTYA
LYAITVTRHWSGGKNESWDTFRRYREFHDLHVSLKENGSNLGNLGLPGKTFFKDLKEDFL
EKRRAELNQYLSTILSLRHPPKSMECLHLFLDAKAYQKTSKTFASKVDTMMRTSVKSVTN
FVTQAPDNLIDGIQRASDKVSDGFMKFSDRLPGSGSERKTSAEELREQMDYNIDNNIPLG
ILLLLMDEVFDLKKRNQWLRRQIVAALQQVIRAIFGDRMNKKIVDYVDSALSADQVAEYV
KKFRDAFWPNGILAEATAERDEATIMRTRVLTKTKLHGVIPDELRPLIGSETSRRGVMLI
FEMVQHEQLNRRFCYVLLEGVLNKIFPHNRFGELFTKFHSASPKMRAYKREMMSRGPEKR
STNHSTRSLRHER
Nucleotide sequence
Length: 2,742
>Phmamm.CG.MTP2014.S409.g08391.02.t
ATGGCTATTGAGTTCTTTTCTTCTTGGGATATACAGATAACGGCAATTGACTATGCACAA
AGAGAATTAAAAGCAGATCAAAGATTAACTGGCTCATCGAATATTGATGAAAAAATACAC
GAATGTGTGGAATACCTGTTACGCGACTATGTCAAATACTGGTACAACGATTTGTCTGAT
GACCCTGAGTTGCTACATTATTTTCGTGTCTCGTTGCATGATGTAATCCGAGCATTCGCA
ATGAGATGCAAAGTTATCGACTGGCAGCCATACTTAACAACAAACCTGGTAGATGACTTT
GCCTCACATGTAAAGTTGTTTCGTAAAGCACAAGACAAAATGCAAAAACTGCAGGCAAAT
GACCAAGGTGACGACCGGGCAGACACAGCATCTGTTAATTCAATCCCAACATCAATGAAC
AAAAATTTTTCAAATGCAAATGACAATGCAAGCCAAGAGGAAATCCCCAAAATTGAAGAT
TTATTTTTTGACAATGAAGTTTCACTTGAAAAGATTTGTCGCGAGCTCATATCATGTGAT
GTAAAAAAACAGTGTGAATATTTGCAGGATGTGTGTGAAGTCTTACTTTACCTTTTATTA
CCTGAAGATGATTTTCATTGCAGGCCGTTAAAGTATTTATTACGGGAAATTATGATACAA
GGCATATTTCTCCCTATGTTCAAGTTGTACAGCGACCCTGACTACCTCAATCTGTATGTT
AATTGGCTGGTTAGTGACAATTGTGTGAGTAGCGAGTGGTTTTTGTCTGTCTTGCGTCGT
AGCAGCATCCTCGGTGAACTCCATGCTGTCCGAGAAAAAGCCGAAGAAGAAATCAATAAA
ATAAGGTCAAAAGATACAGTGGGAGACGATATAACTGTAAAACAGCAGCTGAGCAGCATG
AGATATGTGAAAACATTTTGCGAGCGTAAAATTCACCAACAGCATGAGGGAAATGTTTAT
GTTGATGGCGGAGATCTGTATTTGGAAGGATTGCAGCCCGAACAACGTAACAAACTTTAT
AATTTACCACTGAGTGTAATTCTGCGGAACAATGTTGCATTGCAAATTTTTATCGAATAC
ATGCAGTCTGTAAACGGGCAAGCCTACCTCTTTTTCTGGCTCACTGTGGACGGTTACAGG
GCGTCGGCCGAACAACAGCTCAACGAAGTGAAAATACAACAATTGCAAGGCACTGTGCAG
GGTCGTCCGGATATGGAGATGTTACGAATGATCGGGCGTAATATATACGACCAGTACCTG
AGCAAACACGCCCAGCCCCGTGTCCCGCTCGATCAAACCATCGATCGTCAATTGCAGAAG
AAACTTGAAAGTAGTGAACCATCACCTTATCTGTTCGACGACATTCAGCAAAAAGTGTTC
ATTATTATGCAAAAAGATGAAAATTTCTACCCAGCATTTAAACAAAGCACACTGTATATG
AAGTTACTGGCAGAACTTGACCTTCTGCGTGAACCGAGTTTTACGTCAGCAGACACCAAC
GGTTCCGCTTCTGGCTCGTCCATGGACGAGTTGGCGATTAACGAAAATGAAGAACCGATT
AAACTCACTGCTCTTATTACACAAACAGGAATTTGCAGGGAACACGGCAAAACTTATGCT
CTGTATGCAATCACCGTTACCCGTCATTGGTCTGGAGGCAAAAACGAATCTTGGGATACT
TTCCGACGATATCGAGAATTCCACGACCTGCATGTCAGTCTCAAGGAAAACGGAAGCAAC
CTTGGAAACTTAGGGCTGCCTGGGAAAACATTTTTCAAGGATCTCAAAGAAGATTTCCTA
GAGAAGCGTCGTGCTGAGCTGAACCAATACCTGAGCACTATACTAAGTTTACGCCATCCT
CCCAAGTCGATGGAATGCTTGCATTTGTTCCTAGACGCCAAAGCTTACCAAAAGACCTCT
AAAACTTTCGCCAGCAAGGTTGATACAATGATGAGAACGTCGGTGAAAAGCGTCACTAAC
TTCGTCACTCAAGCTCCCGATAACTTAATAGACGGAATCCAACGGGCCTCGGACAAAGTG
TCAGACGGTTTCATGAAATTTTCAGACCGGCTTCCGGGTTCCGGTTCCGAAAGGAAAACT
TCCGCTGAGGAGCTGAGAGAGCAAATGGATTACAATATCGACAACAATATTCCACTTGGC
ATTCTTCTCCTGCTCATGGACGAAGTTTTCGATTTAAAGAAGCGTAACCAATGGTTACGG
AGACAAATAGTGGCAGCTCTCCAGCAAGTGATTCGAGCAATATTCGGAGATCGAATGAAT
AAAAAGATTGTCGATTATGTGGACAGCGCTCTATCAGCTGATCAGGTGGCAGAATACGTT
AAAAAGTTCCGGGACGCTTTCTGGCCGAACGGAATCCTTGCAGAAGCAACTGCAGAAAGA
GACGAAGCTACGATTATGCGAACCAGAGTTTTAACCAAAACCAAACTCCATGGCGTTATA
CCAGACGAACTTCGACCACTGATCGGGAGCGAGACGAGCCGACGTGGAGTAATGCTCATA
TTTGAAATGGTTCAACATGAGCAACTAAACAGGCGATTCTGTTACGTTCTGCTGGAAGGA
GTGCTTAACAAAATATTTCCACATAACAGGTTCGGTGAACTCTTCACCAAATTTCACTCA
GCTTCGCCCAAAATGCGCGCCTACAAACGTGAGATGATGTCACGTGGTCCCGAGAAACGA
TCAACAAACCACTCGACGCGGAGCTTACGTCACGAGCGGTGA
| ProSiteProfiles |
Phox_assoc (IPR003114) - T[32-248] 36.897 |
| SMART |
Phox_assoc (IPR003114) - T[32-248] 4.1E-26 |
| Pfam |
Phox_assoc (IPR003114) - T[32-243] 1.7E-44 |
| SUPERFAMILY |
RGS_sf (IPR036305) - T[335-486] 3.24E-25 |
| SMART |
RGS (IPR016137) - T[343-483] 3.8E-24 |
| ProSiteProfiles |
RGS (IPR016137) - T[343-483] 15.847 |
| Pfam |
RGS (IPR016137) - T[345-481] 4.8E-18 |
| CDD |
SNX13_RGS (IPR037896) - T[347-481] 5.22297E-65 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[518-634] 9.55E-21 |
| ProSiteProfiles |
Phox (IPR001683) - T[520-637] 15.024 |
| CDD |
SNX13_PX (IPR037437) - T[520-634] 6.44279E-51 |
| Gene3D |
PX_dom_sf (IPR036871) - T[521-647] 4.6E-23 |
| SMART |
Phox (IPR001683) - T[523-634] 1.9E-12 |
| Pfam |
Phox (IPR001683) - T[534-632] 1.4E-15 |
| Pfam |
Sorting_nexin_C (IPR013937) - T[738-847] 2.1E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX13_HUMAN | 42.982 % | 722 | 0 |
| SNX25_HUMAN | 28.399 % | 132 | 2.31E-31 |
