Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S398.g08287.01.t

Possible name(s)

LRRC73; NLRC3; NLRP3

Gene model

Phmamm.CG.MTP2014.S398.g08287

Location

S398 [65,752 / 67,254]

Sequences

Amino acid sequence

Length: 212

>Phmamm.CG.MTP2014.S398.g08287.01.p
GEKLTTDEIKEICSSVRSHQVTLLSLRKCKMSDRDFERLMRSIAKTTSVLQLNLNLGVLS
TDERVLHLSDALNLNRSIQSLFLHGNPLGERGLALLSKSLSLHPSIVNLDVGDCKLTDSC
AKLLSNLLPPDGAKSGLKELVLSSNPGISEVGWSTLFCSIAASSCLRSLSVDYNPAIGDI
GARMLAVIVAGSHSLQHLDMEVCGVTNTAAKV

Nucleotide sequence

Length: 639

>Phmamm.CG.MTP2014.S398.g08287.01.t
GTGGCGAGAAACTAACTACAGATGAAATAAAGGAAATATGTTCTTCCGTAAGAAGTCACC
AAGTAACTTTACTGTCACTTCGCAAATGCAAGATGTCAGATCGAGACTTTGAGCGGCTTA
TGAGATCTATTGCCAAGACAACTTCAGTACTTCAACTCAACCTCAATCTTGGAGTTTTAT
CAACAGATGAAAGAGTTCTTCATCTTTCTGATGCATTAAATCTTAACAGATCAATTCAGT
CATTATTTTTGCATGGAAATCCACTAGGTGAAAGGGGATTGGCATTGCTTTCAAAATCAC
TGTCTTTACATCCTTCAATTGTAAATCTGGATGTTGGGGATTGCAAATTAACAGACAGCT
GTGCAAAACTACTTTCAAATCTACTGCCTCCTGATGGTGCTAAATCAGGGTTAAAAGAGT
TGGTCTTGAGTTCAAACCCAGGAATTTCAGAGGTTGGATGGTCAACATTATTTTGTTCTA
TTGCTGCAAGCTCCTGTCTAAGATCACTAAGTGTTGATTACAACCCGGCAATTGGTGATA
TAGGAGCAAGAATGTTAGCTGTGATTGTAGCTGGCAGCCACAGCTTACAACATCTTGATA
TGGAAGTGTGTGGTGTAACAAATACAGCTGCCAAGGTAG

InterProScan

Gene3D	LRR_dom_sf (IPR032675) - T[1-129] 3.4E-16 - T[130-212] 3.5E-11
Pfam	Leu-rich_rpt (IPR001611) - T[163-186] 0.044

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LRC73_HUMAN	55.66 %	214	1.5E-69