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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S395.g08260.01.t

Possible name(s)

RPL18A

Gene model

Phmamm.CG.MTP2014.S395.g08260

Location

S395 [117,138 / 119,730]

Sequences

Amino acid sequence

Length: 186

>Phmamm.CG.MTP2014.S395.g08260.01.p
AKYQRTASMKAKGELREYRVVGRKLPSEAVPNPPLFRMRLFASNHIAAKSRFWYFLSYYK
KVKKNAGEILQCSKIAEKSPGTVKNFGIWLRYDSRSGTHNMYREYRDVKVANAVTACYRD
MGARHRARPGSIQIMRVEQVTSSKCKRKHVKQFHDSHIRFPMPRTVMSKSQQNAPRFTTN
KPKLFF

Nucleotide sequence

Length: 601

>Phmamm.CG.MTP2014.S395.g08260.01.t
GCCAAGTATCAACGAACGGCAAGCATGAAAGCGAAGGGAGAGTTGAGAGAATACAGAGTA
GTGGGACGAAAACTGCCCTCGGAGGCTGTGCCCAACCCACCCTTGTTTCGCATGCGACTT
TTTGCATCCAACCATATTGCCGCCAAGTCCAGATTTTGGTATTTCCTGTCTTACTACAAG
AAGGTGAAGAAGAATGCAGGAGAAATCTTGCAGTGCAGTAAAATTGCCGAAAAGTCACCA
GGAACTGTGAAAAACTTCGGAATCTGGCTTCGTTACGATTCTCGTAGTGGAACCCACAAC
ATGTACAGGGAGTACAGAGACGTAAAGGTGGCCAATGCAGTCACTGCTTGCTACCGTGAT
ATGGGAGCTAGACACAGAGCCAGACCTGGCAGCATTCAAATCATGAGAGTGGAACAGGTT
ACCTCGTCAAAATGCAAGCGAAAGCACGTCAAACAATTCCATGACTCTCACATTCGCTTC
CCTATGCCACGTACAGTGATGAGCAAATCACAACAGAACGCTCCAAGGTTCACAACCAAC
AAACCCAAGCTTTTCTTCTAAATATTGAAGATTGCAAATAAACGTCAAAAAAATGAACAA
T

InterProScan

PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[9-186] 1.2E-81
PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[9-186] 4.5E-69
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[15-138] 1.5E-52
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[38-138] 36.81

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 66.292 % 253 3.57E-87