- Molecular Tool 'En>dn-FGFR (Stolfi 2011)' >
- Clone 'cien72958' >
- Molecular Tool 'FGF8/17/18>EphrinAb (Stolfi 2011)' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S393.g08237.01.t
Possible name(s)
NECTIN1; NECTIN3; PVR
Gene model
Location
S393 [127,949 / 133,598]
Amino acid sequence
Length: 562
>Phmamm.CG.MTP2014.S393.g08237.01.p
MGRDTSMPCYDPTMASGYESLFVDVVFTPPPTSPPKQPFSVCQYQPGNQALGTVHGSYQG
RVGFTSVGALTLSSVSLTDEGVYTCRPNAFGLVPSSVETNLTVYVTPTVEVRKIEDPLLS
GSGELQAAACTASNGKPPASVEWTTDRNLQFNESTSNIATSSQAQGETVEKVLHIRPTKF
YNGKSFFCVVKHPAFEESVNRVVVLNVTYPPEKAVVIVNNDRDGLTCESEGNPPPTITWL
MPPIAPTSTFRGKTVMLISPQDPSRSNDSYTCVASNGISPNQRTTVTTAFAVTYVEMTQQ
SNVGAIVGGVIGGLALLAIIVLLVYVFLLKPSREKDTGPYQYSGTSMIYKENSGGPRPTI
EHANESLNRNRPPSPSGPPPEDKMDRSDTSSESDSDEGNHDVDVEVNPATNLVDPDRQDN
AEIGGIVSRASNRRKRPSTSPAHRQSRSENNMPRKEESPVPNPRQNVRYDTPPENDYDDD
DQLIQDERYQGYPSEEYDDRYQPQYVGYPAGRQPPRRMDSLPQHEPKYTEIDHTGYQGGH
RRPQFEEPVEYAQIRHGYSHVV
Nucleotide sequence
Length: 1,689
>Phmamm.CG.MTP2014.S393.g08237.01.t
ATGGGGAGAGACACTTCTATGCCATGTTATGATCCAACTATGGCCAGTGGATATGAGAGC
TTGTTTGTTGATGTGGTGTTTACTCCTCCTCCTACTTCTCCACCTAAACAACCTTTTTCT
GTTTGTCAGTATCAGCCTGGTAACCAAGCTTTAGGGACTGTCCATGGCAGCTATCAGGGA
AGAGTTGGATTTACATCTGTCGGTGCTTTAACCTTAAGTAGTGTAAGTTTGACAGACGAG
GGTGTCTATACTTGCAGGCCTAATGCATTTGGTTTGGTGCCATCTTCTGTTGAAACAAAT
CTAACTGTGTATGTTACACCGACTGTGGAAGTTAGAAAAATAGAAGACCCACTTCTATCT
GGCTCTGGGGAACTTCAAGCTGCAGCTTGTACAGCCTCAAATGGAAAACCTCCTGCCAGT
GTTGAATGGACTACAGACAGAAACTTGCAGTTTAATGAATCAACATCAAATATTGCTACC
TCAAGTCAAGCACAAGGGGAGACTGTTGAGAAGGTGCTCCATATTCGTCCGACAAAGTTT
TACAATGGAAAATCTTTCTTTTGTGTTGTAAAGCACCCTGCTTTTGAGGAAAGCGTCAAT
AGAGTAGTTGTTTTAAATGTGACATATCCTCCAGAAAAGGCTGTTGTTATTGTTAACAAT
GACAGAGATGGTCTTACATGTGAATCAGAAGGTAACCCACCACCAACTATAACATGGTTG
ATGCCACCGATTGCCCCAACCTCAACGTTTCGTGGAAAAACAGTGATGTTGATTTCGCCA
CAAGATCCTTCGCGAAGCAATGATTCCTACACATGTGTTGCAAGCAATGGGATTAGTCCA
AACCAAAGAACAACTGTTACAACTGCTTTTGCTGTAACCTACGTGGAAATGACTCAACAA
AGCAATGTGGGTGCAATTGTTGGAGGTGTAATTGGAGGTTTGGCACTCCTTGCTATAATT
GTGCTGCTAGTGTATGTATTTTTGTTGAAACCTTCAAGAGAAAAAGACACTGGTCCTTAC
CAATATTCTGGCACCTCAATGATTTACAAGGAGAACAGTGGTGGTCCACGTCCAACTATT
GAGCATGCCAATGAAAGCCTAAACAGAAACCGACCTCCAAGTCCATCGGGACCTCCTCCA
GAAGATAAGATGGATCGCAGCGATACATCCAGTGAATCAGACTCAGATGAAGGAAATCAT
GATGTTGATGTAGAAGTGAACCCAGCAACAAACCTGGTTGACCCTGACAGACAGGACAAT
GCTGAAATTGGTGGCATTGTCAGTCGCGCCTCAAATCGCAGAAAACGTCCCAGCACTTCC
CCAGCTCACCGACAAAGCCGCAGTGAAAACAATATGCCAAGGAAGGAGGAATCACCTGTA
CCTAATCCAAGGCAGAATGTGAGATATGACACGCCACCAGAAAATGACTATGATGATGAT
GATCAACTGATTCAGGATGAACGATACCAGGGTTACCCCAGTGAGGAATATGATGATCGA
TACCAACCACAATATGTTGGATACCCAGCTGGTCGGCAGCCACCGAGGCGTATGGACAGC
CTTCCACAGCACGAGCCTAAGTACACAGAAATCGATCATACTGGTTACCAAGGAGGACAC
AGAAGGCCGCAATTTGAAGAACCAGTGGAGTATGCTCAAATTCGACATGGGTATTCCCAT
GTGGTGTAA
| Gene3D |
Ig-like_fold (IPR013783) - T[2-115] 2.3E-9 - T[117-213] 5.7E-18 - T[214-296] 1.3E-7 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[36-109] 1.96E-8 - T[129-211] 2.66E-10 - T[203-282] 9.18E-8 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[107-200] 9.627 - T[210-287] 9.01 |
| Pfam |
CD80_C2-set (IPR013162) - T[117-198] 2.9E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NECT3_HUMAN | 35.751 % | 112 | 3.41E-26 |
| PVR_HUMAN | 28.72 % | 82.4 | 9.43E-17 |