- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S38.g01490.02.t
Possible name(s)
RYR1; RYR2; RYR3
Gene model
Location
S38 [182,795 / 193,882]
Amino acid sequence
Length: 1,017
>Phmamm.CG.MTP2014.S38.g01490.02.p
MDQCSVLDLDAYERCIKAETLGHVNDGSSAGEKTMHDADFTCALFRFLQLLCEGHNADFQ
NYLRTQVGNNTTVNIIISTVDYLLRLQESISDFYWYYSAKETIDANGQENFSKAIRVAKQ
VFNSLTEYIQGPCEGNQQALAHSRLWDAVVGFLHVFANMQMKLSQDSGRQLSLLNELLDL
QQDMVVMLLSMLEGNVVDGTIGRQLVDTLIESSHNVGLIIRFFNMFLRLKDITESDKFKV
YDPDNKGLVTRRDFHRAMEASKVYSIDEIEFLLSCALSPDEESLNYQEFTEQFHGPAADI
GFNVAVLLTNLSEHMPKDTRLKKFLEMAEAMLEYFRPNLGRIEIVGGAKRIERVYFNIRS
SSLDQWHKPQVQESKRQFFFDVINTEGDKGRMDEFVNFCEDTIFEMQLAADISEAGFGDG
SGDAECDEEEAELEQGTTGTTASILPSVSLKSVTKQVGKLRAMTWIELFIALFWTVFAVN
KSIFRMSIASARFIYNFLTILLFSNSIILAAKSTTMTKILSDMPNPTREGVEEHTSASES
TDDGIGRRRSTMRDEKDELLSNVFGLDMSHGHELIKAVVNPKRDAGFGDFSVEEAADTLS
MIASDYDSGISTPVTPAGVVRKRRLRRGRGLEKSQISKSGSDHSSTGSPDRDSRRNANLS
DIRGMTFDFDHVNLSDPVQSSPWGHCMHECGRPKRYTTEEKVEDKNAAFWDRVNGINNGI
MWQTISDDLEGAEGSDDMAQISMDDKMEDDTISLPEELQYLEAGLRFFTTIHLFLSLSML
VPLVIFKREKEVARKLEFDGLYVNEDPADDDLPGQWDRLVISCPSFPSNYWDKFVKKKVM
DKFASQCGQEKVRELLGMDQSTTSFLFEEEKTDESLITQMFNNFDLKYTVWKVGVIFCDQ
SFLYLLWYLVMSVFGQYNRFFFSLHLLDIAVCSKGLRTILTSVTHNGKQLILTIGLLTVV
AYLYTVIAFNFFKKFYNKGEGDEPDYKCHSMFTALYLPKTSVMLPQEYFRIQNFMFN
Nucleotide sequence
Length: 3,054
>Phmamm.CG.MTP2014.S38.g01490.02.t
ATGGACCAGTGCAGCGTTCTGGATCTTGACGCTTACGAGAGATGCATCAAAGCAGAGACT
CTCGGTCACGTGAACGATGGTTCATCAGCAGGTGAGAAGACAATGCACGATGCCGACTTT
ACTTGTGCTTTATTCCGCTTTCTGCAACTTCTTTGCGAAGGACACAACGCAGATTTTCAA
AACTATCTGCGGACACAAGTTGGAAACAACACAACGGTAAACATCATCATATCGACCGTC
GACTATTTGTTACGTCTGCAGGAATCCATTAGCGATTTCTATTGGTATTACTCCGCAAAG
GAAACCATTGATGCAAATGGACAAGAAAACTTCTCCAAAGCGATTCGGGTGGCCAAGCAA
GTCTTCAACTCTCTAACTGAATATATACAGGGCCCATGTGAGGGCAACCAGCAAGCATTG
GCTCACAGTCGATTGTGGGATGCTGTGGTCGGATTTCTCCACGTGTTTGCAAATATGCAG
ATGAAACTGTCTCAGGACTCGGGTCGTCAACTGTCGCTACTCAACGAACTACTCGATCTG
CAACAAGACATGGTTGTCATGCTGCTGTCCATGTTGGAAGGTAACGTGGTGGATGGAACG
ATTGGGCGCCAGCTAGTGGACACTTTAATCGAGTCTTCGCACAACGTGGGTCTCATCATT
CGCTTCTTCAACATGTTTCTGCGACTCAAGGACATTACTGAGTCGGACAAATTCAAGGTT
TACGATCCCGATAACAAGGGTTTGGTGACCAGACGAGATTTCCACCGAGCTATGGAAGCT
TCCAAAGTTTACTCCATTGACGAAATTGAATTTCTGCTGAGCTGTGCACTTTCACCTGAT
GAGGAGTCTTTAAATTATCAAGAATTTACGGAACAGTTTCACGGCCCAGCAGCTGACATC
GGCTTCAATGTTGCGGTTCTGCTCACTAACTTATCGGAACATATGCCGAAGGACACAAGA
TTGAAAAAGTTTTTGGAAATGGCAGAAGCGATGTTGGAATATTTCCGACCCAATCTGGGT
AGAATTGAAATCGTCGGAGGAGCGAAACGTATAGAGCGAGTTTACTTTAATATCCGATCA
TCAAGTTTGGATCAGTGGCATAAACCACAAGTTCAAGAATCAAAGCGTCAGTTCTTCTTT
GACGTCATCAACACGGAAGGTGACAAAGGTCGAATGGACGAGTTTGTTAATTTCTGCGAG
GATACCATCTTTGAGATGCAACTTGCCGCTGATATCAGTGAGGCAGGATTCGGAGATGGC
AGTGGAGATGCGGAGTGTGATGAGGAAGAGGCAGAGCTGGAACAGGGCACGACAGGCACC
ACAGCCAGCATTTTGCCGTCGGTCAGTTTAAAGAGTGTCACGAAACAAGTCGGAAAGCTA
CGAGCAATGACGTGGATTGAACTCTTTATTGCTCTCTTTTGGACGGTGTTTGCAGTTAAC
AAATCGATTTTCCGAATGAGTATTGCTTCCGCTAGGTTCATTTACAACTTTTTGACGATT
CTTCTCTTCTCCAACTCCATCATTCTTGCAGCGAAGAGCACCACCATGACGAAAATCCTC
AGTGACATGCCAAATCCCACTAGGGAAGGGGTGGAGGAACATACCTCGGCTTCTGAAAGC
ACTGACGATGGCATTGGACGCCGACGGTCAACGATGCGTGACGAGAAGGACGAACTGCTG
TCGAACGTTTTTGGACTGGATATGTCACATGGACACGAGTTAATCAAGGCGGTCGTGAAC
CCAAAGAGGGACGCAGGTTTCGGTGATTTTTCTGTGGAGGAAGCTGCCGACACACTCAGC
ATGATCGCATCCGATTACGACAGCGGGATCTCGACTCCTGTCACTCCGGCGGGAGTTGTT
AGGAAGAGGAGGTTGCGGAGAGGAAGAGGACTTGAAAAGTCACAGATCAGCAAAAGTGGA
TCAGATCATTCGTCCACTGGCTCTCCTGACCGCGATTCACGACGTAACGCCAACCTCTCT
GATATCAGAGGAATGACCTTCGACTTTGATCACGTGAATTTGTCTGATCCCGTGCAGTCG
TCGCCATGGGGACATTGCATGCATGAATGCGGACGACCGAAACGATACACGACAGAGGAA
AAGGTCGAAGACAAAAATGCGGCTTTCTGGGACCGAGTAAATGGAATTAACAACGGAATA
ATGTGGCAGACGATCAGTGATGATTTAGAGGGGGCAGAAGGAAGTGATGATATGGCACAG
ATTTCTATGGACGATAAGATGGAAGACGACACGATATCACTACCCGAGGAACTGCAATAT
TTGGAAGCTGGATTACGATTTTTCACTACGATTCATCTCTTCCTAAGTTTATCCATGCTA
GTTCCGCTGGTGATTTTCAAACGTGAAAAGGAAGTAGCACGAAAACTCGAGTTTGATGGA
CTTTATGTGAATGAAGATCCGGCTGATGACGATCTTCCTGGTCAGTGGGATCGACTCGTC
ATTTCCTGTCCGTCGTTTCCGTCCAATTACTGGGACAAGTTCGTCAAGAAAAAGGTCATG
GACAAGTTCGCTAGTCAGTGCGGTCAAGAGAAGGTTCGGGAACTTCTTGGAATGGACCAA
TCAACGACCAGCTTTTTGTTTGAAGAAGAGAAAACGGATGAAAGCCTTATTACCCAAATG
TTCAACAACTTTGACCTCAAATACACAGTGTGGAAAGTTGGAGTAATTTTCTGTGATCAG
TCTTTCCTCTATCTTCTCTGGTACCTTGTGATGTCGGTATTTGGACAATACAACCGATTC
TTCTTCTCCCTGCATCTTCTTGACATCGCTGTATGCTCCAAGGGACTTCGAACAATTCTC
ACCTCCGTCACACACAATGGAAAGCAGCTTATTCTCACCATCGGGTTACTGACAGTGGTC
GCTTACCTTTACACGGTGATCGCGTTCAACTTCTTCAAAAAGTTTTACAACAAGGGAGAA
GGTGATGAACCGGATTATAAGTGCCACAGCATGTTTACGGCATTATACTTACCGAAAACA
TCTGTCATGTTGCCCCAGGAATACTTTCGCATTCAGAATTTCATGTTTAATTGA
| PANTHER |
Ryanodine_recept-rel (IPR015925) - T[1-994] 0.0 |
| Pfam |
RIH_assoc-dom (IPR013662) - T[37-153] 2.8E-32 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[235-296] 1.27E-6 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[238-264] 8.627 |
| Pfam |
Ryanrecept_TM4-6 (IPR009460) - T[522-715] 8.1E-11 |
| Pfam |
Ion_trans_dom (IPR005821) - T[913-996] 3.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RYR2_HUMAN | 57.63 % | 665 | 0 |
| RYR1_HUMAN | 65.046 % | 552 | 6.81E-170 |
| RYR3_HUMAN | 48.068 % | 897 | 0 |