- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S384.g08099.02.t
Possible name(s)
CPN2; LRIG3; LRRC15
Gene model
Location
S384 [90,297 / 93,395]
Amino acid sequence
Length: 390
>Phmamm.CG.MTP2014.S384.g08099.02.p
LLLAIYATSALAQEDPEKCSRVPYHSGDETTVTVTCHLNGPITINEDFSYATLHGIQNLA
KEKESPLAAGEDGSNPRKISYRLVMDDSGVSGIEDGGFGYEPTLKDLNLRQNSLEKIGRY
TFVGISNLETLDLGDNSITTIQSRSFVPLPNIKTLTMDNNKLTWVNYFTFQGLYQINYLN
LDNNNISRWSSAAFASLWQLEYLHLAYNRISSLDGSKLAGMNALKFLSLKGNEIDSIAAG
AFNGKPKLETLDLSGNKLNKITVGTFSGLTSLKTLNLRYNVIRTIDDYSFAHMPQLRELD
LSHNGLATLSRGMFMGMENINSFNVADNWMQATALSSEPEFDEPRSKLIEAIGIICRKPG
VYYADLSGNSLKSMLQNVTEQALGFDYSDN
Nucleotide sequence
Length: 1,171
>Phmamm.CG.MTP2014.S384.g08099.02.t
CTACTCTTGGCAATCTACGCCACATCGGCATTAGCCCAGGAAGATCCAGAAAAATGCAGC
AGAGTCCCCTACCACTCCGGTGACGAAACCACTGTGACGGTCACGTGTCACCTGAACGGG
CCAATCACGATCAACGAAGACTTTTCGTATGCAACTCTGCACGGAATCCAAAACCTTGCC
AAGGAAAAAGAGTCTCCGCTTGCTGCAGGGGAAGACGGCTCAAACCCGCGTAAGATATCT
TATCGCCTTGTCATGGACGATTCGGGAGTAAGTGGAATCGAAGATGGCGGATTTGGATAC
GAACCCACTTTAAAGGACCTCAATCTTCGCCAAAATAGCCTCGAGAAAATTGGACGTTAC
ACCTTTGTTGGTATTTCCAACCTTGAGACTCTGGATTTGGGAGATAACTCCATTACAACT
ATCCAATCACGATCGTTCGTGCCTTTGCCTAACATAAAGACATTGACAATGGACAACAAC
AAACTTACATGGGTCAACTACTTCACATTTCAGGGACTTTACCAGATCAACTACCTCAAT
CTCGATAATAACAACATCAGCCGGTGGTCCAGCGCCGCCTTCGCGTCTCTATGGCAACTC
GAGTACCTTCACCTCGCCTACAACCGTATCTCGTCACTTGATGGCAGCAAACTCGCCGGA
ATGAATGCTCTGAAGTTTTTATCTCTCAAGGGCAACGAGATTGATAGCATTGCGGCCGGT
GCTTTCAATGGCAAACCGAAATTGGAGACCCTGGACTTGTCTGGCAACAAGTTGAATAAG
ATCACGGTGGGAACGTTCAGCGGTCTGACGTCACTGAAAACACTGAACCTGCGCTACAAC
GTCATCAGAACTATTGACGACTATTCCTTTGCTCACATGCCTCAGTTGCGCGAGTTGGAT
CTGTCACATAATGGTCTCGCAACATTGAGTCGAGGTATGTTTATGGGAATGGAAAACATC
AACAGTTTTAACGTAGCCGACAATTGGATGCAGGCAACTGCTCTCTCATCGGAACCGGAG
TTCGACGAACCCAGAAGCAAATTGATCGAAGCCATTGGAATCATATGCCGCAAACCAGGA
GTCTACTATGCCGATCTTTCTGGAAACTCATTGAAATCCATGCTTCAGAATGTAACGGAG
CAAGCTCTTGGATTTGACTACTCGGATAACA
| Gene3D |
LRR_dom_sf (IPR032675) - T[74-205] 8.0E-27 - T[206-381] 1.7E-36 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[102-162] 1.2E-15 - T[246-306] 2.4E-20 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[102-124] 160.0 - T[125-148] 0.87 - T[149-172] 16.0 - T[173-196] 7.0 - T[197-220] 50.0 - T[221-244] 1.9 - T[246-268] 1.1 - T[269-292] 0.014 - T[293-316] 3.9E-4 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[103-124] 6.557 - T[127-148] 8.066 - T[151-172] 4.963 - T[175-196] 6.434 - T[199-220] 7.381 - T[223-244] 6.11 - T[247-268] 7.758 - T[271-292] 7.774 - T[295-316] 7.196 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CPN2_HUMAN | 32.618 % | 119 | 1.7E-29 |
| LRC15_HUMAN | 32.636 % | 107 | 2.07E-25 |
| LRIG3_HUMAN | 32.599 % | 115 | 1.16E-27 |