- Transcript 'KH2012:KH.C3.151.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S384.g08099.01.t
Possible name(s)
CPN2; LRIG3; LRRC15
Gene model
Location
S384 [90,276 / 93,418]
Amino acid sequence
Length: 404
>Phmamm.CG.MTP2014.S384.g08099.01.p
MSKLAAILLLAIYATSALAQEDPEKCSRVPYHSGDETTVTVTCHLNGPITINEDFSYATL
HGIQNLAKEKESPLAAGEDGSNPRKISYRLVMDDSGVSGIEDGGFGYEPTLKDLNLRQNS
LEKIGRYTFVGISNLETLDLGDNSITTIQSRSFVPLPNIKTLTMDNNKLTWVNYFTFQGL
YQINYLNLDNNNISRWSSAAFASLWQLEYLHLAYNRISSLDGSKLAGMNALKFLSLKGNE
IDSIAAGAFNGKPKLETLDLSGNKLNKITVGTFSGLTSLKTLNLRYNVIRTIDDYSFAHM
PQLRELDLSHNGLATLSRGMFMGMENINSFNVADNWMQATALSSEPEFDEPRSKLIEAIG
IICRKPGVYYADLSGNSLKSMLQNVTEQALGFDYSDNNQHVCVF
Nucleotide sequence
Length: 1,215
>Phmamm.CG.MTP2014.S384.g08099.01.t
ATGTCAAAACTTGCCGCAATCCTACTCTTGGCAATCTACGCCACATCGGCATTAGCCCAG
GAAGATCCAGAAAAATGCAGCAGAGTCCCCTACCACTCCGGTGACGAAACCACTGTGACG
GTCACGTGTCACCTGAACGGGCCAATCACGATCAACGAAGACTTTTCGTATGCAACTCTG
CACGGAATCCAAAACCTTGCCAAGGAAAAAGAGTCTCCGCTTGCTGCAGGGGAAGACGGC
TCAAACCCGCGTAAGATATCTTATCGCCTTGTCATGGACGATTCGGGAGTAAGTGGAATC
GAAGATGGCGGATTTGGATACGAACCCACTTTAAAGGACCTCAATCTTCGCCAAAATAGC
CTCGAGAAAATTGGACGTTACACCTTTGTTGGTATTTCCAACCTTGAGACTCTGGATTTG
GGAGATAACTCCATTACAACTATCCAATCACGATCGTTCGTGCCTTTGCCTAACATAAAG
ACATTGACAATGGACAACAACAAACTTACATGGGTCAACTACTTCACATTTCAGGGACTT
TACCAGATCAACTACCTCAATCTCGATAATAACAACATCAGCCGGTGGTCCAGCGCCGCC
TTCGCGTCTCTATGGCAACTCGAGTACCTTCACCTCGCCTACAACCGTATCTCGTCACTT
GATGGCAGCAAACTCGCCGGAATGAATGCTCTGAAGTTTTTATCTCTCAAGGGCAACGAG
ATTGATAGCATTGCGGCCGGTGCTTTCAATGGCAAACCGAAATTGGAGACCCTGGACTTG
TCTGGCAACAAGTTGAATAAGATCACGGTGGGAACGTTCAGCGGTCTGACGTCACTGAAA
ACACTGAACCTGCGCTACAACGTCATCAGAACTATTGACGACTATTCCTTTGCTCACATG
CCTCAGTTGCGCGAGTTGGATCTGTCACATAATGGTCTCGCAACATTGAGTCGAGGTATG
TTTATGGGAATGGAAAACATCAACAGTTTTAACGTAGCCGACAATTGGATGCAGGCAACT
GCTCTCTCATCGGAACCGGAGTTCGACGAACCCAGAAGCAAATTGATCGAAGCCATTGGA
ATCATATGCCGCAAACCAGGAGTCTACTATGCCGATCTTTCTGGAAACTCATTGAAATCC
ATGCTTCAGAATGTAACGGAGCAAGCTCTTGGATTTGACTACTCGGATAACAATCAGCAC
GTCTGCGTTTTTTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[18-214] 1.9E-27 - T[215-398] 9.6E-36 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[109-131] 160.0 - T[132-155] 0.87 - T[156-179] 16.0 - T[180-203] 7.0 - T[204-227] 50.0 - T[228-251] 1.9 - T[253-275] 1.1 - T[276-299] 0.014 - T[300-323] 3.9E-4 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[109-169] 1.3E-15 - T[253-313] 2.6E-20 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[110-131] 6.557 - T[134-155] 8.066 - T[158-179] 4.963 - T[182-203] 6.434 - T[206-227] 7.381 - T[230-251] 6.11 - T[254-275] 7.758 - T[278-299] 7.774 - T[302-323] 7.196 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CPN2_HUMAN | 32.618 % | 119 | 2.46E-29 |
| LRC15_HUMAN | 32.636 % | 108 | 1.77E-25 |
| LRIG3_HUMAN | 32.599 % | 115 | 1.37E-27 |