- Transcript 'Moocci.CG.ELv1_2.S54...' >
- Transcript 'Cisavi.CG.ENS81.R24....' >
- Transcript 'KH2012:KH.C5.625.v1....' >
- Transcript 'KH2012:KH.C9.748.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S384.g08092.01.t
Possible name(s)
LGR4; LRIG2; LRIG3
Gene model
Location
S384 [42,830 / 45,547]
Amino acid sequence
Length: 355
>Phmamm.CG.MTP2014.S384.g08092.01.p
MLTKLVAILVLALCATFAVAQENQDECTRVLSHYGNETTVTVTCHLDGPITINENFTYAT
LHGIQNPAKQKESAVTDTEDDTTSNTISYRLIMAESGVSAIEDVGFGSVPNLKELNLGQN
SLVSIGLLTFSGASNLENLDLGDNSITTIQPRSFVPLSNVKTLNLNNNNLTSINFFTFQG
LDQVQYLYLDNNNISRWLSAAFASLWQLKYLHLAYNRISSLDGSKLTGMNSLKYLSLKDN
VIESIEDGAFNGKPNLETLDLSGLATLSRGMLVGMENIKSFNVADNWMQATALSSDPEYG
EPRSKLIESIGVVCRKPGVYYADFSGNSLTSMLQNVTEQCLGFDFSDPSQHVCVF
Nucleotide sequence
Length: 1,068
>Phmamm.CG.MTP2014.S384.g08092.01.t
ATGTTGACAAAGCTGGTTGCTATTCTAGTATTGGCATTGTGCGCCACTTTTGCCGTGGCT
CAAGAAAATCAAGATGAATGCACCAGGGTCCTGTCTCACTACGGCAACGAAACTACTGTG
ACTGTCACGTGTCACCTAGACGGACCAATCACAATTAATGAAAACTTTACGTATGCAACT
CTCCACGGAATCCAAAACCCTGCCAAGCAAAAAGAGTCTGCAGTTACTGATACAGAAGAT
GACACAACGTCAAACACAATCTCATATCGCCTTATCATGGCCGAGTCTGGGGTCAGCGCT
ATAGAAGACGTTGGTTTTGGATCCGTACCTAATCTTAAGGAACTTAATCTTGGCCAAAAT
AGCCTTGTCAGTATTGGACTTTTGACCTTTTCTGGTGCATCGAATCTGGAGAATCTGGAT
TTGGGAGATAACTCCATCACAACTATCCAACCGCGGTCGTTCGTGCCACTGAGCAACGTC
AAAACTTTAAATTTGAACAACAACAATCTTACTTCGATCAACTTCTTCACATTTCAGGGA
CTTGACCAGGTCCAGTACCTTTATCTCGATAACAACAACATCAGCCGGTGGTTAAGCGCC
GCCTTCGCGTCTCTATGGCAACTCAAGTACCTCCACCTCGCCTACAACCGTATTTCCTCA
CTTGATGGCAGCAAACTTACAGGAATGAACTCTCTTAAATATTTATCTCTGAAGGACAAC
GTGATCGAAAGCATCGAGGATGGTGCTTTCAACGGCAAACCAAATTTGGAGACCTTGGAC
TTGTCTGGTCTCGCAACATTGAGTCGAGGCATGCTTGTTGGAATGGAAAACATCAAAAGT
TTTAACGTAGCCGACAATTGGATGCAGGCAACTGCTCTCTCGTCGGATCCAGAGTACGGC
GAACCCAGAAGCAAATTGATTGAATCCATTGGAGTCGTATGCCGCAAGCCAGGAGTTTAC
TATGCAGACTTTTCTGGAAACTCTCTTACTTCTATGCTTCAGAATGTGACAGAACAATGT
CTTGGATTTGATTTCTCTGATCCCAGTCAGCATGTCTGCGTTTTCTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[72-226] 1.4E-32 - T[227-340] 1.7E-10 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[109-132] 4.8 - T[134-156] 15.0 - T[157-180] 0.42 - T[181-204] 5.9 - T[205-228] 81.0 - T[229-252] 0.74 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[111-132] 7.527 - T[135-156] 7.92 - T[159-180] 7.481 - T[183-204] 5.656 - T[207-227] 7.389 - T[231-252] 7.319 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[134-194] 5.9E-15 - T[207-263] 3.9E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LGR4_HUMAN | 34.756 % | 91.3 | 5.58E-20 |
| LRIG2_HUMAN | 36.601 % | 94 | 6.34E-21 |
| LRIG3_HUMAN | 35.976 % | 89.4 | 2.26E-19 |