- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Clone 'cien123268' >
- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S381.g08047.01.t
Possible name(s)
HNRNPDL; MSI1; MSI2
Gene model
Location
S381 [44,595 / 52,891]
Amino acid sequence
Length: 233
>Phmamm.CG.MTP2014.S381.g08047.01.p
MAAEATQPPSLTDTTEHPLDPGKMFIGGLSWQTTADGLKEYFSRFGEVSDAMVMRDPATK
RSRCVFNSRCISVFASVLVGSHPCFECPRKRVKPNLSPPCCIDVWVISLRVVYSPYNRGF
GFVTYNDAKDVDKVLRNGQHTLDQKEIDPKVAIPRKVQTKMVTRTKKIFVGGLSANTVVE
DLKAYFGTYGKVEDAMLMFDKQTNRHRGGCVALAVIRLLIPSLIVVYSASVAE
Nucleotide sequence
Length: 702
>Phmamm.CG.MTP2014.S381.g08047.01.t
ATGGCTGCGGAAGCAACACAGCCGCCTTCATTGACTGACACAACGGAACATCCGCTTGAC
CCAGGGAAAATGTTTATCGGGGGTCTGAGTTGGCAAACAACGGCTGATGGCCTGAAAGAG
TACTTCAGTCGATTCGGAGAGGTATCTGACGCTATGGTGATGCGAGACCCGGCCACTAAG
CGCTCCAGGTGTGTATTTAACTCGCGTTGTATTTCTGTTTTCGCGTCCGTGCTCGTGGGG
TCACATCCGTGTTTCGAATGCCCTCGAAAACGAGTTAAGCCCAACTTAAGCCCTCCTTGT
TGCATCGACGTATGGGTTATCTCTCTGCGTGTTGTTTATTCACCATACAACAGAGGATTC
GGATTCGTGACTTACAACGACGCGAAAGACGTGGATAAAGTGTTGCGCAACGGACAGCAT
ACCCTCGACCAGAAAGAGATCGATCCGAAGGTCGCCATCCCTCGCAAAGTTCAAACCAAG
ATGGTTACAAGGACAAAGAAAATTTTCGTCGGGGGCCTTTCTGCAAACACCGTTGTTGAA
GACCTCAAAGCGTACTTCGGCACATATGGCAAGGTTGAAGACGCCATGCTGATGTTCGAC
AAGCAGACGAACCGCCATCGAGGAGGATGTGTCGCGCTGGCTGTAATACGACTGCTTATA
CCCAGTTTGATTGTTGTGTATTCGGCCAGCGTTGCTGAATAG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[9-64] 1.29E-12 - T[107-210] 1.09E-19 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[20-66] 4.1E-13 - T[101-163] 4.7E-7 - T[164-211] 1.4E-11 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[22-164] 12.492 - T[166-208] 9.797 |
| SMART |
RRM_dom (IPR000504) - T[23-150] 2.0E-9 - T[167-227] 0.011 |
| Pfam |
RRM_dom (IPR000504) - T[25-64] 2.0E-7 - T[168-210] 8.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HNRDL_HUMAN | 35.821 % | 107 | 2.42E-27 |
| MSI2H_HUMAN | 45.933 % | 158 | 4.79E-47 |
| MSI1H_HUMAN | 46.635 % | 169 | 6.14E-51 |