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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3781.g18016.01.t

Possible name(s)

CILP; CILP2; SVEP1

Location

S3781 [7,963 / 10,357]

Sequences

Amino acid sequence

Length: 346

>Phmamm.CG.MTP2014.S3781.g18016.01.p
MFYDVGNQVTYSCDSGYAVEGFYMLTCMANGRWNYDTPQCTVIETPSCVNGNWTFFFLPF
RSNREGVFVTLHEFCRSYPDMCPEQLPSSVEVVSFDEQEPVMPYRTRNQIVHFDPQIGLY
CLHAEQIDGRPCERYAVRFCLPHPTGAPSCSQNWTTYFDQDDPFNTGDYEFMVDLTSKQS
VCQNYPTAIDVRLSDTNEDYRNRNRTVLLAGAQFWCRNIDEPSSERCNNYKIRFCCEEVQ
CPTNNWTPFFNLDEPGGQGDLEMIIDVKREMPNEMCSGNVLAIDARHELNGDEGYSRNFR
SVHLDVNIGFWCINAEQPFGMDCYDYKVRFCCDSTRITDSGDEAQG

Nucleotide sequence

Length: 1,041

>Phmamm.CG.MTP2014.S3781.g18016.01.t
ATGTTTTATGATGTTGGCAATCAAGTCACCTATTCGTGCGATAGCGGATATGCCGTGGAA
GGATTTTATATGCTAACCTGTATGGCAAACGGGAGATGGAACTATGACACACCCCAGTGC
ACTGTAATAGAAACTCCCAGCTGCGTCAACGGCAACTGGACGTTCTTCTTCTTGCCGTTC
AGATCCAACAGAGAGGGAGTCTTTGTCACTTTACACGAGTTCTGTCGTTCTTACCCAGAC
ATGTGTCCTGAGCAACTGCCTAGCTCTGTCGAAGTTGTGTCTTTCGACGAGCAGGAACCA
GTAATGCCATATCGAACCAGAAATCAAATTGTACACTTCGATCCTCAGATTGGTCTCTAT
TGTCTTCATGCGGAGCAGATTGACGGACGACCTTGCGAGCGCTATGCAGTCCGGTTTTGT
TTGCCCCATCCAACAGGGGCACCGTCTTGTAGTCAGAATTGGACAACGTACTTTGATCAA
GACGACCCGTTTAACACAGGCGACTATGAATTTATGGTTGACCTTACTAGCAAACAGTCA
GTTTGCCAAAACTACCCAACCGCTATCGACGTTCGGTTGTCGGACACAAATGAGGATTAT
AGGAACAGAAACCGCACTGTCTTGTTGGCAGGTGCACAGTTTTGGTGCCGAAATATAGAT
GAACCATCATCAGAAAGGTGCAACAACTACAAGATTCGTTTCTGCTGCGAAGAGGTCCAA
TGCCCAACAAATAACTGGACTCCATTTTTTAACTTGGACGAACCGGGTGGTCAAGGGGAT
TTAGAGATGATTATCGATGTGAAACGAGAAATGCCGAACGAAATGTGCTCGGGAAATGTC
CTAGCAATTGATGCCAGACATGAATTAAACGGGGATGAGGGTTATTCACGCAATTTTCGC
TCCGTGCACCTCGACGTAAACATTGGGTTCTGGTGTATTAACGCTGAACAACCCTTCGGA
ATGGATTGCTACGACTACAAAGTTCGCTTTTGTTGCGACAGCACAAGGATAACTGACAGC
GGAGATGAAGCACAAGGATAA

InterProScan

ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[1-42] 10.778
Pfam
Sushi_SCR_CCP_dom (IPR000436) - T[2-40] 8.7E-8
SUPERFAMILY
Sushi/SCR/CCP_sf (IPR035976) - T[3-43] 1.95E-10
CDD
Sushi_SCR_CCP_dom (IPR000436) - T[3-40] 1.36065E-7
Pfam
WxxW_domain (IPR025155) - T[65-140] 3.1E-5 - T[154-236] 5.4E-12 - T[246-332] 4.7E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value