Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S376.g07990.01.t

Possible name(s)

SMYD1; SMYD3; SMYD5

Gene model

Phmamm.CG.MTP2014.S376.g07990

Location

S376 [82,314 / 89,371]

Sequences

Amino acid sequence

Length: 383

>Phmamm.CG.MTP2014.S376.g07990.01.p
QKLPFVVRKTENKGFVLFATKDLNAGDEILVEEPLVSCQFAWNKLYIYLACDYCMKSLET
AESMSQRLTENRSLSLPHPECCERNVAITVQCPQCEITYCSTSCRDKAFTEYHQILCPHS
QYCSPEGLEQLDETWRNIHYPPETATVWLLAKIMTRVKMEKNKAEFISYIEEFCHQCKNE
SEEIVHKLLGDQFKDQLHMLREQLKSLFYSDDIAHWFTVEGFEKLFALLGTNQQGIGSSA
LSVWVHNCDNLDLPDGQRDQLDTFIDKLYEDLEKVSGSFLNCEGAGLYRVQSKCNHSCAP
NAEVSFLHNDHRLTVKAINDVAAGEEITISYLSECELNRSRHSRQKHLRENYLFTCWCKK
CQAQNGDPDVTSDEDSEDDMDDT

Nucleotide sequence

Length: 1,260

>Phmamm.CG.MTP2014.S376.g07990.01.t
CAAAAACTACCATTTGTTGTAAGAAAAACAGAAAACAAGGGTTTTGTTTTATTTGCAACC
AAAGACCTTAATGCTGGTGATGAGATCTTGGTAGAAGAACCTTTAGTAAGTTGTCAATTT
GCTTGGAACAAGCTCTACATATACTTGGCTTGTGACTATTGTATGAAATCATTAGAAACT
GCTGAGAGCATGTCTCAAAGGTTGACAGAAAACAGATCTTTATCTCTTCCCCACCCTGAA
TGCTGTGAGAGAAATGTTGCCATCACAGTACAATGTCCTCAATGTGAGATAACTTATTGC
TCTACATCTTGTCGGGACAAAGCCTTCACTGAATATCATCAGATTTTGTGTCCACATTCC
CAGTATTGCAGTCCTGAAGGATTAGAACAATTGGATGAAACATGGAGAAACATACATTAC
CCACCGGAAACTGCAACAGTGTGGTTGTTGGCCAAAATAATGACCAGGGTTAAAATGGAG
AAAAACAAAGCTGAGTTTATTTCATACATTGAGGAATTTTGTCATCAATGTAAAAATGAA
TCAGAAGAAATTGTTCACAAGCTTCTTGGAGACCAGTTTAAAGATCAATTACACATGTTG
CGAGAACAGCTCAAGTCTCTTTTCTACAGCGATGATATTGCCCATTGGTTTACAGTGGAA
GGTTTTGAAAAACTTTTTGCATTGCTTGGCACAAATCAGCAAGGTATAGGGAGCAGTGCC
TTGAGTGTTTGGGTACACAACTGTGATAATCTGGATCTGCCTGATGGACAGCGTGATCAG
CTGGACACCTTTATAGACAAACTTTATGAAGATTTAGAAAAAGTTTCTGGTTCGTTTCTT
AACTGTGAGGGGGCAGGTTTGTACCGTGTACAAAGCAAATGCAACCACAGTTGTGCGCCA
AATGCAGAAGTCAGTTTTCTACACAATGATCACAGATTAACAGTAAAAGCTATTAACGAT
GTTGCTGCTGGCGAGGAAATAACTATCTCGTATTTAAGTGAATGTGAACTTAACCGAAGT
CGCCATTCCAGGCAGAAGCATTTAAGAGAAAATTATCTATTCACGTGCTGGTGTAAAAAG
TGCCAAGCTCAAAATGGTGACCCCGATGTTACGTCCGATGAAGACAGTGAAGATGACATG
GATGATACTTGATAACAATAACGTTGTGTAAATGATGTTGTCCGGCGGTAGAAACTAGTG
GGGATGGTATTTGGGACTGGGAAGCACTTCTGCTTGCAATGTTGTCTTGCGAATGGCGAA

InterProScan

ProSiteProfiles	SET_dom (IPR001214) - T[3-332] 14.916
SMART	SET_dom (IPR001214) - T[3-338] 8.3E-8
Pfam	SET_dom (IPR001214) - T[14-331] 1.9E-13
Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[337-382] 1.3E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SMYD5_HUMAN	52.909 %	399	6.68E-138