- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S374.g07966.01.t
Possible name(s)
NPAS3; SIM1; SIM2
Gene model
Location
S374 [43,102 / 50,532]
Amino acid sequence
Length: 606
>Phmamm.CG.MTP2014.S374.g07966.01.p
MKAAKDGGSVLKCDNSHELTLYAEWISARAWEEASLCSFTETQYPHNYNNWAAACGHYVG
GGIRTHERQFLASHLLQSLDGFLFVLGADGKIMYMSETASVHLGLSQVELTGNSVYEYIH
PGDHDEMKAVLTAPPPPPSTSYPQICWEYEAERCFFTRMKCVLAKRNAGLTSGGYKVIHC
TGYIKVRYVVFDQVSDLLGYEPQDLLDKTLYHYVHTSDVLHLREAHHKLLNKGQVKTKYY
RFLTRNGGWVWVQSHVTIVHNSRSSRPHCIVSVNYVISNVEARDLVMAAEQIEPSKVPQF
QNKSSYSERNRRKKSKSSSRNTATTENEPHNKTYKSRLRNRHSSPNNATVTSQSESATSP
NNATVTSQSESATSQRDDVYKWDGEYQAKKLRCSDDDTANFSPEVTQQSPTSSKHAHAQS
AADSWYKHPMWDGRDRELAYPERRLADSNFSSYHHHVLYHYHHHHHHGIGADPGLRDKDR
AGVDHLGRPFYGILPNQHHISSFNNLHAMHHHPATNGLHDVTDRQYKRHHHHDDPAASDV
KQYEYEDKSTGQSDPATSCRYAKDAYDVTKPSSVTYEGNLSLKYMAENRTFSYRTHYANT
AYMQPT
Nucleotide sequence
Length: 1,821
>Phmamm.CG.MTP2014.S374.g07966.01.t
ATGAAGGCCGCGAAAGACGGTGGTTCGGTTTTGAAGTGTGATAACTCTCACGAGTTGACC
CTTTACGCCGAGTGGATTAGTGCGAGGGCTTGGGAAGAGGCCAGTTTGTGTTCATTCACA
GAAACTCAATATCCTCACAACTACAACAACTGGGCTGCGGCATGTGGACATTATGTCGGC
GGTGGGATTCGAACCCACGAACGACAATTTCTTGCGTCACATCTGCTACAAAGTTTGGAC
GGTTTTCTGTTTGTTCTTGGAGCAGATGGGAAAATAATGTACATGTCCGAAACTGCTTCT
GTGCATCTTGGATTGTCACAGGTTGAATTAACGGGGAACAGCGTTTACGAGTACATACAT
CCCGGGGATCATGATGAAATGAAAGCAGTGTTAACAGCACCCCCGCCACCTCCCAGCACG
TCATATCCGCAGATATGCTGGGAGTATGAAGCAGAAAGATGTTTCTTTACAAGAATGAAG
TGTGTTTTAGCGAAACGCAACGCAGGTTTAACCAGCGGTGGATACAAGGTCATCCATTGT
ACTGGTTACATCAAAGTTCGCTACGTGGTTTTCGACCAAGTTTCCGATCTGTTGGGCTAC
GAACCTCAAGACTTGTTGGATAAAACACTTTACCACTACGTTCATACAAGCGATGTTCTG
CATCTCAGGGAAGCGCACCACAAACTTTTGAACAAAGGCCAGGTAAAGACGAAGTATTAC
CGCTTTCTAACTCGCAACGGAGGCTGGGTGTGGGTGCAGAGTCACGTGACAATCGTTCAC
AACAGTCGGTCATCGCGGCCCCACTGCATCGTCAGCGTCAATTACGTCATAAGCAACGTT
GAAGCTCGCGATTTGGTGATGGCGGCTGAACAGATCGAGCCCTCCAAAGTTCCTCAGTTC
CAAAACAAGAGCAGTTACAGCGAGAGAAACCGACGAAAGAAGTCGAAATCTTCATCACGA
AACACTGCGACTACCGAAAACGAGCCACACAATAAAACCTACAAATCGCGACTACGCAAC
CGTCACAGCAGCCCAAACAATGCAACAGTGACGTCACAATCCGAAAGCGCTACTAGCCCA
AACAATGCAACAGTGACGTCACAATCCGAAAGCGCTACGTCACAACGTGATGACGTGTAC
AAATGGGACGGCGAGTACCAAGCCAAGAAACTGCGATGTTCGGATGACGACACGGCAAAC
TTTTCCCCGGAAGTGACGCAACAATCACCTACGTCATCGAAGCACGCGCATGCGCAGAGC
GCGGCCGACTCGTGGTACAAGCACCCCATGTGGGACGGCCGCGATCGGGAGTTAGCGTAC
CCCGAGCGCCGTTTAGCGGATAGTAACTTTTCCTCGTATCACCACCACGTGTTATACCAC
TACCACCATCATCACCACCACGGTATAGGAGCCGATCCTGGGTTAAGGGATAAAGACAGG
GCTGGGGTTGATCACCTGGGACGACCGTTTTACGGAATTCTACCAAATCAACATCATATA
AGTTCCTTTAACAATCTACACGCAATGCACCACCACCCTGCAACAAACGGTCTTCATGAC
GTCACAGACAGACAATACAAACGTCATCATCACCATGACGACCCGGCGGCGAGTGACGTC
AAACAATACGAGTACGAAGATAAGTCAACGGGCCAATCGGATCCCGCCACGTCATGTCGA
TACGCAAAAGACGCGTATGACGTCACTAAACCGTCATCAGTGACGTATGAGGGCAACTTG
TCACTCAAGTATATGGCGGAGAATAGGACGTTCTCATACAGGACTCATTACGCCAACACG
GCGTATATGCAACCGACGTGA
| ProSiteProfiles |
PAS (IPR000014) - T[68-131] 16.574 - T[192-233] 11.713 |
| SMART |
PAS (IPR000014) - T[69-136] 5.4E-10 - T[165-231] 67.0 |
| Pfam |
PAS_fold (IPR013767) - T[74-132] 3.5E-10 |
| CDD |
PAS (IPR000014) - T[79-131] 3.3224E-11 - T[192-273] 2.80265E-15 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[79-133] 1.57E-13 - T[194-278] 2.09E-21 |
| Pfam |
PAS_fold_3 (IPR013655) - T[192-274] 9.1E-20 |
| TIGRFAM |
PAS (IPR000014) - T[194-270] 1.6E-6 |
| SMART |
PAC (IPR001610) - T[237-280] 6.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIM2_HUMAN | 49.847 % | 309 | 1.18E-96 |
| SIM1_HUMAN | 56.842 % | 313 | 3.98E-97 |
| NPAS3_HUMAN | 35.786 % | 193 | 1.48E-52 |
