- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L149.21.v1...' >
- Transcript 'KH2012:KH.S404.1.v3....' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S373.g07954.02.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
S373 [77,042 / 88,935]
Amino acid sequence
Length: 492
>Phmamm.CG.MTP2014.S373.g07954.02.p
MRKYLKERNDLTLVVLHAKVAQKSYGNEKRFFCPPPCMYLLGSGWKKKQQVLEDEEGTPE
AGQVHAFIGIGSNEQDMQQLHLDGKNFCTAKTLYISDTDKRKHFMLNVKMFFGTGADVGQ
FHSKRIKVISKPSKKKQSLKNADLCIPSGTKVALFNRLRSQTVSTRYLHVEKGNFHASSI
QWGCFAIHLLDDDESESEEFSVMDGYIHYGQTVKLVCSNTGMALPRLIIRKVDKQTAILD
ADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKETNKEMINDGASWTIISTDK
AEYTFCDGMGPTADPVTPVPTVHSLQLNGGGDVAMLEVKGENFTPLLKVWFGEIESDTMY
RCAEGLLCVVPDISAFREGWKWVKETVQVPINLVRNDGIIYATNLTFTFTPEAGPRQHCP
SSMSILHPKRPLPTMPPTPGSEDDAGRHTDHEQGMPMKRTALEVNGMPVASDSAVVSTMN
GSALGNMLRTAS
Nucleotide sequence
Length: 1,479
>Phmamm.CG.MTP2014.S373.g07954.02.t
ATGCGCAAATACTTGAAGGAACGCAACGACCTTACCTTGGTTGTGCTGCACGCCAAGGTC
GCTCAGAAGTCCTACGGCAATGAGAAGAGGTTTTTTTGTCCTCCACCCTGTATGTATCTT
TTGGGATCTGGCTGGAAAAAGAAACAACAAGTTCTTGAAGATGAGGAAGGCACCCCAGAA
GCAGGACAGGTTCATGCCTTTATTGGGATTGGCAGCAACGAGCAAGACATGCAGCAACTG
CACTTGGATGGCAAGAACTTTTGCACTGCAAAGACTTTGTATATCTCGGACACAGACAAG
CGCAAGCACTTCATGCTCAACGTAAAGATGTTCTTCGGCACCGGCGCCGATGTCGGTCAG
TTCCACAGCAAACGTATCAAGGTGATCAGTAAGCCGTCCAAGAAGAAGCAGTCGCTCAAG
AACGCTGATCTTTGTATACCGTCCGGAACGAAGGTGGCTCTCTTCAATCGGCTCAGATCC
CAAACCGTCAGCACCCGATACCTTCATGTTGAGAAGGGAAATTTTCACGCAAGCTCAATA
CAATGGGGATGTTTCGCCATTCACCTTCTTGACGATGACGAATCAGAATCGGAAGAATTT
TCGGTGATGGACGGCTACATACATTACGGCCAGACAGTGAAGCTAGTATGTTCAAATACC
GGGATGGCCTTACCAAGGCTAATTATTCGAAAGGTTGACAAACAAACAGCGATATTGGAC
GCCGATGATCCTGTCTCCCAACTCCACAAGTGCGCATTCTACTTGAAAGACACTGAACGA
ATGTACTTGTGTTTGTCCCAGGAAAGGATCATCCAATTTCAGGCGACGCCTTGTCCCAAA
GAAACAAACAAAGAGATGATTAACGATGGCGCATCGTGGACAATCATCAGCACTGACAAA
GCCGAGTACACCTTCTGTGATGGCATGGGACCAACTGCTGACCCTGTTACTCCTGTTCCA
ACCGTGCATAGCCTTCAGTTGAATGGTGGTGGCGACGTGGCAATGCTTGAAGTTAAAGGC
GAAAATTTCACCCCGCTACTGAAGGTTTGGTTTGGAGAGATCGAGTCTGATACGATGTAC
AGATGTGCAGAGGGTTTGTTGTGCGTGGTGCCCGACATATCGGCGTTCAGGGAAGGCTGG
AAATGGGTAAAGGAAACAGTCCAGGTTCCTATTAATCTGGTTCGCAACGACGGGATTATT
TACGCCACCAACCTCACCTTCACATTCACCCCTGAAGCCGGACCTCGACAACACTGTCCA
TCCTCGATGAGTATCCTGCACCCAAAGAGGCCCTTACCCACCATGCCTCCAACGCCGGGT
TCAGAAGACGATGCTGGTCGTCACACGGACCACGAGCAGGGAATGCCAATGAAACGGACT
GCTCTTGAAGTGAACGGCATGCCTGTTGCGTCAGATTCGGCCGTGGTGTCAACCATGAAC
GGTTCCGCTTTAGGTAACATGCTCCGGACTGCCTCATGA
| Gene3D |
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[1-318] 7.5E-163 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-143] 2.11E-57 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[12-143] 1.3E-81 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[13-143] 6.3E-48 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[141-298] 2.62E-64 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[144-293] 8.2E-89 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[144-293] 4.8E-72 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[299-411] 1.1E-34 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[315-411] 2.16725E-62 |
| Gene3D |
Ig-like_fold (IPR013783) - T[320-413] 2.1E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 76.667 % | 737 | 0 |
| RBPJL_HUMAN | 48.707 % | 468 | 5.49E-162 |