- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S373.g07954.01.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
S373 [76,790 / 89,331]
Amino acid sequence
Length: 507
>Phmamm.CG.MTP2014.S373.g07954.01.p
SFHEKWPPKRLTRAAMRKYLKERNDLTLVVLHAKVAQKSYGNEKRFFCPPPCMYLLGSGW
KKKQQVLEDEEGTPEAGQVHAFIGIGSNEQDMQQLHLDGKNFCTAKTLYISDTDKRKHFM
LNVKMFFGTGADVGQFHSKRIKVISKPSKKKQSLKNADLCIPSGTKVALFNRLRSQTVST
RYLHVEKGNFHASSIQWGCFAIHLLDDDESESEEFSVMDGYIHYGQTVKLVCSNTGMALP
RLIIRKVDKQTAILDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKETNKE
MINDGASWTIISTDKAEYTFCDGMGPTADPVTPVPTVHSLQLNGGGDVAMLEVKGENFTP
LLKVWFGEIESDTMYRCAEGLLCVVPDISAFREGWKWVKETVQVPINLVRNDGIIYATNL
TFTFTPEAGPRQHCPSSMSILHPKRPLPTMPPTPGSEDDAGRHTDHEQGMPMKRTALEVN
GMPVASDSAVVSTMNGSALGNMLRTAS
Nucleotide sequence
Length: 1,922
>Phmamm.CG.MTP2014.S373.g07954.01.t
GATCTTTCCACGAGAAATGGCCGCCGAAGCGACTTACGAGAGCGGCGATGCGCAAATACT
TGAAGGAACGCAACGACCTTACCTTGGTTGTGCTGCACGCCAAGGTCGCTCAGAAGTCCT
ACGGCAATGAGAAGAGGTTTTTTTGTCCTCCACCCTGTATGTATCTTTTGGGATCTGGCT
GGAAAAAGAAACAACAAGTTCTTGAAGATGAGGAAGGCACCCCAGAAGCAGGACAGGTTC
ATGCCTTTATTGGGATTGGCAGCAACGAGCAAGACATGCAGCAACTGCACTTGGATGGCA
AGAACTTTTGCACTGCAAAGACTTTGTATATCTCGGACACAGACAAGCGCAAGCACTTCA
TGCTCAACGTAAAGATGTTCTTCGGCACCGGCGCCGATGTCGGTCAGTTCCACAGCAAAC
GTATCAAGGTGATCAGTAAGCCGTCCAAGAAGAAGCAGTCGCTCAAGAACGCTGATCTTT
GTATACCGTCCGGAACGAAGGTGGCTCTCTTCAATCGGCTCAGATCCCAAACCGTCAGCA
CCCGATACCTTCATGTTGAGAAGGGAAATTTTCACGCAAGCTCAATACAATGGGGATGTT
TCGCCATTCACCTTCTTGACGATGACGAATCAGAATCGGAAGAATTTTCGGTGATGGACG
GCTACATACATTACGGCCAGACAGTGAAGCTAGTATGTTCAAATACCGGGATGGCCTTAC
CAAGGCTAATTATTCGAAAGGTTGACAAACAAACAGCGATATTGGACGCCGATGATCCTG
TCTCCCAACTCCACAAGTGCGCATTCTACTTGAAAGACACTGAACGAATGTACTTGTGTT
TGTCCCAGGAAAGGATCATCCAATTTCAGGCGACGCCTTGTCCCAAAGAAACAAACAAAG
AGATGATTAACGATGGCGCATCGTGGACAATCATCAGCACTGACAAAGCCGAGTACACCT
TCTGTGATGGCATGGGACCAACTGCTGACCCTGTTACTCCTGTTCCAACCGTGCATAGCC
TTCAGTTGAATGGTGGTGGCGACGTGGCAATGCTTGAAGTTAAAGGCGAAAATTTCACCC
CGCTACTGAAGGTTTGGTTTGGAGAGATCGAGTCTGATACGATGTACAGATGTGCAGAGG
GTTTGTTGTGCGTGGTGCCCGACATATCGGCGTTCAGGGAAGGCTGGAAATGGGTAAAGG
AAACAGTCCAGGTTCCTATTAATCTGGTTCGCAACGACGGGATTATTTACGCCACCAACC
TCACCTTCACATTCACCCCTGAAGCCGGACCTCGACAACACTGTCCATCCTCGATGAGTA
TCCTGCACCCAAAGAGGCCCTTACCCACCATGCCTCCAACGCCGGGTTCAGAAGACGATG
CTGGTCGTCACACGGACCACGAGCAGGGAATGCCAATGAAACGGACTGCTCTTGAAGTGA
ACGGCATGCCTGTTGCGTCAGATTCGGCCGTGGTGTCAACCATGAACGGTTCCGCTTTAG
GTAACATGCTCCGGACTGCCTCATGACACCTTGCGGGCGGGAATCTGCACTAGAAACAAC
CCCGCGTGGGCAGTCGAGAGCTATTGCCCAACGTGTACGAATCTGCTGATGTGTTGGGAT
GGGCTCCAAAATTGACGCGCGGGTTACAATAAAGTTAACCGTGAGGAATGATGGCGCAAA
CGCACAGATTCTCGCGCGACAGTTTTTACTTCTTGCTCGACCGGAACTGGACCCTTTTCG
AGCTTGTTTCTTCAATTTGTTTGTTTTGCGTTTTTGCGTCTGGTCTTTAGTCCGGCAAGC
CTCAAATCCCAATATATCTGCTATTCACAGCTCTCAACGGTCGCAGGAAATGCTTTATTT
ATTTTGTTTTCGTATTTTTTTGAAGTTCAACTGAGTGACCCTTTTTTTGACCAGAAAGTA
CA
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[10-158] 2.98E-59 |
| Gene3D |
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[11-333] 2.0E-164 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[27-158] 1.3E-81 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[28-158] 6.7E-48 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[156-313] 2.75E-64 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[159-308] 8.2E-89 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[159-308] 5.1E-72 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[314-426] 1.15E-34 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[330-426] 3.05233E-62 |
| Gene3D |
Ig-like_fold (IPR013783) - T[335-428] 2.2E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 76.509 % | 756 | 0 |
| RBPJL_HUMAN | 48.401 % | 470 | 1.73E-162 |