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TRANSCRIPT CARD

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  1. Region 'REG00001118'
  2. Transcript 'KH2012:KH.C1.313.v1....'
  3. Transcript 'Phfumi.CG.MTP2014.S9...'
  4. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S373.g07954.01.t

Possible name(s)

RBPJ; RBPJL

Location

S373 [76,790 / 89,331]

Sequences

Amino acid sequence

Length: 507

>Phmamm.CG.MTP2014.S373.g07954.01.p
SFHEKWPPKRLTRAAMRKYLKERNDLTLVVLHAKVAQKSYGNEKRFFCPPPCMYLLGSGW
KKKQQVLEDEEGTPEAGQVHAFIGIGSNEQDMQQLHLDGKNFCTAKTLYISDTDKRKHFM
LNVKMFFGTGADVGQFHSKRIKVISKPSKKKQSLKNADLCIPSGTKVALFNRLRSQTVST
RYLHVEKGNFHASSIQWGCFAIHLLDDDESESEEFSVMDGYIHYGQTVKLVCSNTGMALP
RLIIRKVDKQTAILDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKETNKE
MINDGASWTIISTDKAEYTFCDGMGPTADPVTPVPTVHSLQLNGGGDVAMLEVKGENFTP
LLKVWFGEIESDTMYRCAEGLLCVVPDISAFREGWKWVKETVQVPINLVRNDGIIYATNL
TFTFTPEAGPRQHCPSSMSILHPKRPLPTMPPTPGSEDDAGRHTDHEQGMPMKRTALEVN
GMPVASDSAVVSTMNGSALGNMLRTAS

Nucleotide sequence

Length: 1,922

>Phmamm.CG.MTP2014.S373.g07954.01.t
GATCTTTCCACGAGAAATGGCCGCCGAAGCGACTTACGAGAGCGGCGATGCGCAAATACT
TGAAGGAACGCAACGACCTTACCTTGGTTGTGCTGCACGCCAAGGTCGCTCAGAAGTCCT
ACGGCAATGAGAAGAGGTTTTTTTGTCCTCCACCCTGTATGTATCTTTTGGGATCTGGCT
GGAAAAAGAAACAACAAGTTCTTGAAGATGAGGAAGGCACCCCAGAAGCAGGACAGGTTC
ATGCCTTTATTGGGATTGGCAGCAACGAGCAAGACATGCAGCAACTGCACTTGGATGGCA
AGAACTTTTGCACTGCAAAGACTTTGTATATCTCGGACACAGACAAGCGCAAGCACTTCA
TGCTCAACGTAAAGATGTTCTTCGGCACCGGCGCCGATGTCGGTCAGTTCCACAGCAAAC
GTATCAAGGTGATCAGTAAGCCGTCCAAGAAGAAGCAGTCGCTCAAGAACGCTGATCTTT
GTATACCGTCCGGAACGAAGGTGGCTCTCTTCAATCGGCTCAGATCCCAAACCGTCAGCA
CCCGATACCTTCATGTTGAGAAGGGAAATTTTCACGCAAGCTCAATACAATGGGGATGTT
TCGCCATTCACCTTCTTGACGATGACGAATCAGAATCGGAAGAATTTTCGGTGATGGACG
GCTACATACATTACGGCCAGACAGTGAAGCTAGTATGTTCAAATACCGGGATGGCCTTAC
CAAGGCTAATTATTCGAAAGGTTGACAAACAAACAGCGATATTGGACGCCGATGATCCTG
TCTCCCAACTCCACAAGTGCGCATTCTACTTGAAAGACACTGAACGAATGTACTTGTGTT
TGTCCCAGGAAAGGATCATCCAATTTCAGGCGACGCCTTGTCCCAAAGAAACAAACAAAG
AGATGATTAACGATGGCGCATCGTGGACAATCATCAGCACTGACAAAGCCGAGTACACCT
TCTGTGATGGCATGGGACCAACTGCTGACCCTGTTACTCCTGTTCCAACCGTGCATAGCC
TTCAGTTGAATGGTGGTGGCGACGTGGCAATGCTTGAAGTTAAAGGCGAAAATTTCACCC
CGCTACTGAAGGTTTGGTTTGGAGAGATCGAGTCTGATACGATGTACAGATGTGCAGAGG
GTTTGTTGTGCGTGGTGCCCGACATATCGGCGTTCAGGGAAGGCTGGAAATGGGTAAAGG
AAACAGTCCAGGTTCCTATTAATCTGGTTCGCAACGACGGGATTATTTACGCCACCAACC
TCACCTTCACATTCACCCCTGAAGCCGGACCTCGACAACACTGTCCATCCTCGATGAGTA
TCCTGCACCCAAAGAGGCCCTTACCCACCATGCCTCCAACGCCGGGTTCAGAAGACGATG
CTGGTCGTCACACGGACCACGAGCAGGGAATGCCAATGAAACGGACTGCTCTTGAAGTGA
ACGGCATGCCTGTTGCGTCAGATTCGGCCGTGGTGTCAACCATGAACGGTTCCGCTTTAG
GTAACATGCTCCGGACTGCCTCATGACACCTTGCGGGCGGGAATCTGCACTAGAAACAAC
CCCGCGTGGGCAGTCGAGAGCTATTGCCCAACGTGTACGAATCTGCTGATGTGTTGGGAT
GGGCTCCAAAATTGACGCGCGGGTTACAATAAAGTTAACCGTGAGGAATGATGGCGCAAA
CGCACAGATTCTCGCGCGACAGTTTTTACTTCTTGCTCGACCGGAACTGGACCCTTTTCG
AGCTTGTTTCTTCAATTTGTTTGTTTTGCGTTTTTGCGTCTGGTCTTTAGTCCGGCAAGC
CTCAAATCCCAATATATCTGCTATTCACAGCTCTCAACGGTCGCAGGAAATGCTTTATTT
ATTTTGTTTTCGTATTTTTTTGAAGTTCAACTGAGTGACCCTTTTTTTGACCAGAAAGTA
CA

InterProScan

SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[10-158] 2.98E-59
Gene3D
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[11-333] 2.0E-164
SMART
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[27-158] 1.3E-81
Pfam
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[28-158] 6.7E-48
SUPERFAMILY
BTD_sf (IPR036358) - T[156-313] 2.75E-64
SMART
Beta-trefoil_DNA-bd_dom (IPR015350) - T[159-308] 8.2E-89
Pfam
Beta-trefoil_DNA-bd_dom (IPR015350) - T[159-308] 5.1E-72
SUPERFAMILY
Ig_E-set (IPR014756) - T[314-426] 1.15E-34
CDD
RBP-Jkappa_IPT (IPR038007) - T[330-426] 3.05233E-62
Gene3D
Ig-like_fold (IPR013783) - T[335-428] 2.2E-38

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SUH_HUMAN 76.509 % 756 0
RBPJL_HUMAN 48.401 % 470 1.73E-162