- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L19.3.v1.A...' >
- Transcript 'KH2012:KH.L19.3.v2.A...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S371.g07919.01.t
Possible name(s)
FOXD4; FOXF1; FOXF2
Gene model
Location
S371 [25,207 / 27,423]
Amino acid sequence
Length: 480
>Phmamm.CG.MTP2014.S371.g07919.01.p
MDGSTQHLRGLSPVDMYPRMGAPPHNPHAQLTQQRSLPVMGHHYAHHTQTQLHHTNSVDV
NGHLQQPPQQQYSMPPKPNSQHLFQQHGLQTVSQLATKPDIGMTTPNRPPSGDSLLGAQQ
NAMAPLSHHLHMQQSPTLDPTQARTVEELAHNENSNNNNSKVDGTAASTDGNSSSISDGP
LDNVGLDQSLNLGSANGDPETPPSADEEGSDGMSNSGVKKGGDANGMGHRRPEKPPYSYI
ALISSPAKKLTLSEIYNFLQTRFEFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKG
HYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPYGIFGPPTGLIGPQGYGSPHDMFGPG
GMPPGAMAPPPHRGHNFMSFDPHFFNGAVAAVTANGMASPASTSPTMPPKDPCTPQSPQH
PHTNGQFASNGVEAPAVPNMNQKLRGGQRIKILAACFELRVFDADSNDILGVGNFEFHAN
Nucleotide sequence
Length: 1,443
>Phmamm.CG.MTP2014.S371.g07919.01.t
ATGGATGGGAGCACTCAGCATTTGCGTGGCCTCAGCCCAGTCGACATGTACCCGCGAATG
GGGGCACCTCCGCACAACCCTCATGCACAGCTCACTCAACAGCGATCCCTGCCTGTGATG
GGACACCACTACGCACATCACACCCAAACTCAGCTACACCACACCAATAGCGTGGATGTG
AACGGACATCTTCAACAGCCACCCCAGCAACAGTACAGCATGCCACCAAAGCCAAATAGC
CAGCATTTATTCCAGCAGCACGGACTTCAGACGGTGTCACAGCTTGCTACAAAACCAGAC
ATTGGTATGACCACCCCGAATCGACCCCCAAGCGGGGATTCACTCCTTGGGGCTCAACAG
AACGCGATGGCCCCGCTATCGCACCATTTACACATGCAGCAGTCGCCCACCCTAGATCCA
ACGCAAGCAAGAACTGTGGAGGAGTTGGCTCACAACGAAAATTCGAACAATAACAATAGT
AAAGTCGATGGCACCGCAGCAAGCACTGATGGCAACAGCTCAAGCATTTCGGATGGCCCT
TTGGACAACGTAGGTCTTGATCAGAGTCTGAATCTTGGATCCGCCAATGGAGACCCTGAG
ACACCACCTAGTGCTGATGAGGAGGGAAGCGACGGAATGTCAAACTCTGGTGTGAAGAAA
GGAGGCGATGCTAACGGCATGGGACACAGGCGTCCTGAAAAGCCACCGTACTCGTATATT
GCGTTGATCAGTTCCCCAGCAAAGAAACTTACACTCAGCGAGATTTACAACTTCTTACAA
ACGCGCTTTGAGTTTTTTCGCGGCTCCTACCAAGGCTGGAAGAACTCAGTGCGTCACAAT
CTTTCACTCAACGAGTGTTTTATCAAACTGCCCAAGGGACTCGGTCGACCGGGAAAGGGA
CATTACTGGACCATTGACCCCGCAAGTGAGTTTATGTTCGAGGAGGGATCGTTCCGTCGG
CGACCAAGAGGCTTTAGACGAAAATGCCAGGCCCTGAAACCGTACGGAATTTTCGGCCCA
CCGACAGGTCTTATCGGACCCCAGGGTTACGGTTCCCCACACGATATGTTTGGCCCGGGA
GGAATGCCACCCGGCGCCATGGCCCCACCACCCCACCGTGGACACAATTTCATGAGTTTT
GACCCACATTTCTTCAACGGAGCCGTCGCCGCGGTAACAGCCAATGGAATGGCGAGTCCA
GCATCCACGTCCCCAACCATGCCCCCTAAAGACCCCTGTACCCCGCAATCGCCCCAGCAT
CCCCACACCAACGGTCAGTTTGCGTCCAACGGGGTCGAAGCCCCGGCTGTCCCCAACATG
AATCAGAAACTTAGGGGAGGACAGCGCATTAAAATTCTAGCAGCCTGCTTTGAATTAAGG
GTTTTTGACGCCGATTCGAACGATATCTTGGGCGTGGGAAATTTCGAGTTTCACGCGAAT
TAG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[221-323] 1.1E-35 |
| SMART |
Fork_head_dom (IPR001766) - T[232-317] 7.3E-48 |
| Pfam |
Fork_head_dom (IPR001766) - T[233-313] 2.0E-29 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[233-322] 8.62E-32 |
| PRINTS |
Fork_head_dom (IPR001766) - T[234-247] 5.4E-10 - T[273-290] 5.4E-10 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[234-323] 31.848 |
| CDD |
Fork_head_dom (IPR001766) - T[234-306] 4.73589E-44 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[273-279] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 56.311 % | 129 | 1.07E-32 |
| FOXF1_HUMAN | 60.891 % | 191 | 1.89E-56 |
| FOXF2_HUMAN | 90 % | 187 | 4.96E-54 |