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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R15....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S7...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S36.g01410.02.t

Possible name(s)

RNF139; RNF145; SYVN1

Gene model

Phmamm.CG.MTP2014.S36.g01410

Location

S36 [115,179 / 117,222]

Sequences

Amino acid sequence

Length: 372

>Phmamm.CG.MTP2014.S36.g01410.02.p
MDNWWLFLNNLSSDVAALPFVVNRHCGLLPDFQSRTSDFASKTDGAKNQTCYWSWLHWSV
TDHPPDSVSGPLTGAIDGVTLLIMTLYTDILHFNDEGRFVLLIYILFTIASSQSIFSIVD
PILMTLATAHTGSVWKHIRTVLLAFLLLFISGLLSYISLFTMRSTFWIFIVAYNYINTFS
LMLGSLAIYFILMIDYLTIRGWNSLDDVMFYIRGACRAVEFCVTLCMCGYIMMTFYTEMT
SMAGIIMLAVYTYYCIVQRGGKGWKIWTMRRQASNKVCSLPQASKKDLIEKKGDLCPICY
QGMEADVRIMHCGHLFHENCLKKWFYIQDKCPMCYMEYNPNLNASKLKAGNESEHVSDNN
ATSPEPSESENT

Nucleotide sequence

Length: 1,119

>Phmamm.CG.MTP2014.S36.g01410.02.t
ATGGATAACTGGTGGTTATTCCTCAACAACCTTAGTTCAGATGTTGCAGCTTTGCCATTT
GTTGTCAATCGCCACTGTGGTCTTTTACCTGACTTCCAAAGTAGAACAAGTGATTTTGCA
AGCAAAACTGATGGTGCTAAAAATCAAACTTGTTATTGGTCTTGGTTACATTGGTCAGTT
ACTGACCATCCTCCTGACTCAGTGAGTGGACCTTTAACAGGTGCTATCGATGGAGTCACA
CTGTTGATTATGACACTTTACACAGATATCTTACATTTCAATGATGAGGGTCGATTTGTC
CTTTTAATCTACATCTTATTTACAATAGCATCTTCCCAGAGTATTTTCAGCATTGTGGAT
CCCATCTTAATGACATTAGCAACAGCCCACACAGGTTCAGTGTGGAAGCATATTAGAACA
GTGCTCCTTGCCTTTCTGCTTCTTTTTATTTCAGGTCTTCTTTCCTACATTTCACTTTTT
ACAATGAGGTCCACATTTTGGATATTTATTGTGGCTTACAATTACATCAACACCTTCTCT
TTAATGTTGGGATCGTTAGCAATTTATTTCATATTGATGATTGACTATTTGACAATTCGC
GGGTGGAATAGCTTGGATGATGTCATGTTTTACATCCGTGGTGCTTGTAGAGCTGTTGAA
TTTTGTGTTACACTGTGTATGTGTGGTTATATCATGATGACCTTCTATACCGAAATGACA
AGCATGGCTGGCATAATAATGCTGGCTGTGTACACTTACTACTGCATAGTGCAAAGAGGT
GGTAAAGGTTGGAAAATTTGGACAATGAGAAGGCAGGCATCCAATAAAGTTTGCTCCCTT
CCCCAAGCTTCCAAAAAAGACTTAATCGAAAAGAAAGGTGACCTTTGCCCCATATGCTAC
CAGGGTATGGAAGCTGATGTCAGGATAATGCATTGTGGTCACCTTTTCCATGAAAATTGT
CTGAAGAAATGGTTTTACATTCAGGATAAATGTCCCATGTGTTATATGGAATATAATCCG
AACTTAAATGCATCGAAGCTAAAAGCAGGCAATGAAAGCGAACATGTTTCAGATAATAAT
GCAACCTCGCCAGAGCCTTCAGAGAGTGAAAACACATGA

InterProScan

Pfam
TRC8_N_dom (IPR025754) - T[73-264] 6.7E-37
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[269-345] 5.1E-15
Pfam
Znf_RING (IPR001841) - T[295-334] 1.9E-10
SMART
Znf_RING-CH (IPR011016) - T[295-335] 0.0062
ProSiteProfiles
Znf_RING (IPR001841) - T[296-334] 12.165
SMART
Znf_RING (IPR001841) - T[296-334] 1.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN139_HUMAN 30.201 % 139 1.66E-36
RN145_HUMAN 36.334 % 183 3.19E-52