- Molecular Tool 'Mitf>Twist' >
- Transcript 'KH2012:KH.C7.477.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S368.g07898.01.t
Possible name(s)
MEIS1; MEIS2; MEIS3
Gene model
Location
S368 [117,537 / 144,515]
Amino acid sequence
Length: 445
>Phmamm.CG.MTP2014.S368.g07898.01.p
HPLFPLLALVFEKCELATCTPRDPGVTGSDVCSSDSFNDDIACFAKQIQAENRPLTFDPN
NEIDNLMILSIQVLRFHLLELEKVHELCQNFTSRYINCLKGKMPIDLVIDDRDGAMTSKS
EGLDVGGSSGQSFYPQEAPSSRPQISGESSNIHPSVMGASGSTPMGPSSTMNHHQPPQPH
PHPQQQPQHHHHSADSSSPTGSTLEGSTYSGDGGGEDDSDPGKKPQQKKRGIFPKQATNI
MRAWLFQNLTHPYPSEDQKKSLANQTGLTILQVNNWFINARRRIVQPMIDQSNRAVSNMG
PYSPDGQSMSSFIMDGQPHHMSMRHPGWPSGFQGMPGAADMMAAHNMSMAGNTFNTPSTI
SPSHQLHHQLRHPPSQAMILSGSHHHHHAAAAAAIMMPHHVAAAAAAASHTVAAAGMGHP
QHGHHLHGQTPMNPADMPSHMLGHC
Nucleotide sequence
Length: 1,982
>Phmamm.CG.MTP2014.S368.g07898.01.t
CACCCACTGTTCCCGCTTCTGGCGCTTGTGTTCGAAAAGTGCGAGCTGGCCACCTGCACA
CCACGTGACCCTGGAGTGACCGGAAGTGACGTTTGTTCGTCGGATTCCTTCAACGACGAC
ATCGCCTGTTTTGCAAAGCAGATACAGGCGGAAAATCGACCTCTCACCTTTGACCCCAAC
AACGAAATCGACAACTTGATGATTTTGTCGATACAAGTCCTGAGGTTTCATCTTCTGGAA
CTCGAAAAAGTTCACGAATTGTGTCAAAACTTCACGTCTCGGTATATCAACTGCCTTAAA
GGGAAAATGCCCATTGATCTCGTCATAGACGATCGTGACGGTGCTATGACGTCAAAATCG
GAGGGCCTTGATGTGGGGGGAAGCTCCGGACAGTCGTTTTACCCCCAAGAAGCCCCATCG
TCTCGGCCCCAGATTTCGGGGGAAAGCAGCAACATTCATCCCTCAGTTATGGGGGCAAGC
GGATCGACCCCCATGGGGCCATCAAGTACTATGAATCATCATCAGCCCCCGCAACCCCAC
CCACACCCTCAACAGCAACCTCAACATCATCACCACAGCGCCGACAGTTCCAGTCCCACA
GGAAGCACACTAGAGGGCAGCACTTACTCCGGAGACGGGGGCGGCGAGGACGATTCGGAC
CCTGGAAAAAAGCCCCAGCAGAAGAAAAGGGGAATTTTTCCCAAGCAGGCGACCAATATT
ATGAGGGCGTGGCTCTTCCAAAATTTAACGCACCCTTATCCTTCGGAAGACCAGAAAAAA
TCGTTGGCGAATCAGACCGGGCTCACCATATTACAAGTGAACAATTGGTTTATTAACGCG
AGAAGGCGGATTGTTCAGCCGATGATTGACCAGTCTAATCGAGCAGTCAGCAATATGGGG
CCGTACAGTCCCGATGGTCAATCGATGAGCAGTTTTATTATGGACGGCCAACCCCATCAC
ATGTCCATGCGACACCCAGGATGGCCGTCAGGATTTCAGGGAATGCCAGGCGCGGCAGAC
ATGATGGCAGCGCACAACATGTCCATGGCAGGGAACACATTCAACACGCCCTCCACTATA
TCTCCCTCCCATCAATTGCATCATCAACTACGTCATCCGCCCTCACAAGCCATGATCTTG
TCAGGATCGCATCACCACCACCACGCCGCTGCAGCAGCTGCGATCATGATGCCCCACCAC
GTGGCCGCTGCTGCTGCCGCCGCTAGTCACACGGTGGCGGCAGCGGGCATGGGTCATCCG
CAGCACGGTCATCATTTGCACGGACAAACGCCCATGAACCCGGCCGATATGCCGTCACAC
ATGCTCGGACACTGCTAGCATTGTGACGTCACATAGACGTTTAACTGTGACGTCACAGTT
GATGCGCGTCTTCTCACATGGTTCCATTATTATTATTTCCTACCTCTGCCAAAAAGTCGC
ACACATTTTTGCGTCACAAACGACGCCCACCGTGTCAATTCCCTGACGTCATAGACGTGT
TATTTATTGTGTGTGACGTAACAGTCACCCGCTGACGTCATCACAGCGACGGTACAGGTC
GGCCACTAAACGGCGCTATGCATCGCGATGTCGCCGAGTAGGATTTCTATGTTCACTCGA
AATGGGAATGTGCAATCGTTGTTCGATTTCGAAGAATCGCGCGTCGTTGCCAAGGCAACC
AGGTTTTCGACGATGACCACCGCAGTAAAAGTAATTGGTCATTGTTGCGTCACAAAGTGA
CAACAGACCCGCTCCCGTTTATCGTTTTTTTTTTCTCAGCCATGACGTGAAGTGCTATGT
GTTACGGCGTTTTGTTGCAAACGTGTATTGTCTGTGGACGCCGCTTTGGTTCACGAAATT
CATTTGCAACTTTTTATATGTTTACCTTTTCACGCGGAGTTTTTGTACGTCCATGCTACG
CGAATTAGGAAAACACAGTTTTTTAACGTAGATGAAAGTTACTGCACAATTTTACTGAAA
CC
| Pfam |
PKNOX/Meis_N (IPR032453) - T[28-113] 2.1E-41 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[224-287] 12.989 |
| SMART |
Homeobox_dom (IPR001356) - T[226-291] 2.4E-12 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[226-299] 2.78E-19 |
| CDD |
Homeobox_dom (IPR001356) - T[228-283] 5.64463E-15 |
| Pfam |
Homeobox_KN_domain (IPR008422) - T[244-283] 3.2E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MEIS2_HUMAN | 57.107 % | 352 | 7.73E-118 |
| MEIS1_HUMAN | 60.123 % | 341 | 1.82E-114 |
| MEIS3_HUMAN | 55.357 % | 316 | 4.42E-105 |