Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S366.g07863.01.t

Possible name(s)

Phmamm.CG.MTP2014.S366.g07863

Gene model

Phmamm.CG.MTP2014.S366.g07863

Location

S366 [11,252 / 13,853]

Sequences

Amino acid sequence

Length: 689

>Phmamm.CG.MTP2014.S366.g07863.01.p
MQLSWKERNPQESAETLHDLALAYRQQAKKGDKNHDKRISLLRSAVLFNAAIVRKPENVG
EIEEDLKKLCYHVLELADAKQKKADLLDKAKQIFKKVDDMRKTVLDALEKMPSLQKQATH
EEEKKAKLKHTEEIEGLQLLVAEQYKGIMGEIMDYCVSVMGKSPLSEMLKYLESDENLKN
GYHLADILTKTCFVAGDHEIYDKFQDGVKRATQSTNAKKDLYYQTQEDFEGYNALKIGSA
LVSQEKINFKHTVYRSTSLFVTALIRAYDIEADSPFDAIDKLPEEVEEEISRHDNKYMLA
LACEVRLKAYASKKAQVDWHPNYYDVYAREKSSKQTFNPTILDILGLDDTVKIMLNASKL
QEIALQKLGLSLKMISDGHEEDGIDKESIELLKKGEILYYKGCYRQALLQFEKGKQVSEE
LHTDNDCLIDLTKLNDMEYQNYIVDELDIRKKLLRENIDKQEQGGIQFEIAECQNQLQQH
DESKDSYQKTIDLLESNTNLPNKKEISADDHNILAQCYKQLERHNVAVKHFKAEINIMEK
QKLPLTKIVEKKKEFADYLLLQGQDAQADEQISEVINLLEDCLKNQSDLEQKVDLLFQIS
CCYFKQQKYQKALNTFRDKTFQQGYDLPGSIYKQILSQQHTFKYYIWVGRCLSSLNRCDD
AINYFHESLPILDESMSGKEKTIEIGVEL

Nucleotide sequence

Length: 2,070

>Phmamm.CG.MTP2014.S366.g07863.01.t
ATGCAACTGTCTTGGAAAGAAAGAAATCCCCAAGAAAGTGCAGAAACTTTACATGACCTG
GCACTTGCATATCGGCAACAAGCCAAAAAAGGTGATAAAAACCACGACAAAAGAATTTCA
CTTCTCAGAAGTGCAGTGTTGTTTAATGCTGCTATAGTGAGGAAACCTGAAAATGTTGGA
GAAATTGAGGAAGATCTTAAAAAACTTTGTTATCATGTCCTTGAACTGGCTGATGCCAAA
CAAAAGAAAGCAGATTTACTTGATAAAGCAAAACAAATATTTAAAAAAGTTGATGATATG
AGAAAAACAGTCTTGGATGCTTTGGAAAAAATGCCATCACTGCAAAAACAAGCAACACAT
GAAGAGGAGAAAAAGGCAAAATTAAAACACACAGAAGAAATTGAAGGCCTCCAATTACTA
GTAGCTGAGCAATACAAAGGCATTATGGGTGAAATAATGGACTATTGTGTATCAGTTATG
GGTAAATCCCCTTTGAGTGAAATGCTAAAGTACCTTGAAAGTGATGAAAATCTCAAAAAT
GGCTACCACCTTGCTGACATTCTAACAAAAACTTGCTTTGTGGCTGGAGACCATGAAATA
TATGACAAGTTTCAAGATGGAGTAAAAAGAGCAACACAATCCACCAATGCTAAAAAAGAT
CTGTATTATCAAACACAAGAAGATTTTGAAGGCTATAATGCATTGAAAATTGGAAGTGCA
CTTGTAAGTCAGGAAAAAATAAACTTTAAGCACACAGTTTATCGAAGCACAAGTTTATTT
GTTACTGCATTAATCCGAGCTTATGACATTGAAGCTGATTCCCCTTTCGATGCAATTGAT
AAACTGCCTGAAGAGGTAGAAGAAGAAATCTCAAGGCATGATAACAAATATATGCTTGCA
TTGGCATGTGAAGTTAGATTAAAAGCTTATGCGTCAAAAAAAGCCCAGGTTGATTGGCAT
CCTAATTATTATGATGTTTATGCAAGAGAAAAGAGTAGCAAACAAACATTCAATCCAACC
ATTCTGGATATACTTGGATTAGATGACACAGTTAAAATAATGTTAAATGCGTCAAAACTA
CAGGAAATTGCTCTGCAAAAACTAGGCCTGTCTCTTAAAATGATTTCAGATGGCCATGAA
GAAGATGGAATTGACAAAGAGTCCATTGAGTTGCTGAAAAAAGGTGAAATTCTTTATTAC
AAGGGATGCTACAGACAAGCATTGCTACAGTTTGAAAAAGGTAAACAAGTTTCAGAGGAA
TTGCATACTGATAATGATTGCCTAATAGACTTAACAAAGTTAAATGACATGGAATATCAA
AACTATATTGTTGACGAGTTGGATATTAGAAAAAAATTACTGAGGGAAAATATCGACAAA
CAGGAACAAGGAGGCATTCAGTTTGAAATAGCAGAATGTCAAAACCAGCTTCAACAACAC
GATGAATCCAAAGATAGTTATCAAAAAACTATCGACCTACTAGAAAGTAACACAAATCTT
CCAAATAAAAAAGAAATATCTGCTGATGACCACAACATATTGGCGCAATGTTATAAGCAA
CTAGAAAGACATAATGTGGCTGTTAAACATTTCAAAGCTGAAATAAACATTATGGAAAAG
CAAAAATTGCCTTTGACAAAAATTGTTGAAAAGAAAAAAGAATTTGCAGACTACTTGCTT
TTGCAAGGACAAGATGCACAAGCAGATGAACAAATATCAGAGGTCATAAATTTGTTGGAA
GACTGTTTGAAAAATCAGTCTGACCTGGAGCAAAAAGTTGACTTGTTGTTTCAAATAAGT
TGCTGCTATTTCAAACAACAAAAATATCAAAAAGCCCTGAATACGTTTCGGGATAAAACA
TTCCAACAGGGATACGATCTTCCAGGTTCAATTTATAAACAAATTTTGTCCCAGCAGCAT
ACATTTAAGTATTATATCTGGGTTGGTCGATGCCTTTCCTCATTAAACAGGTGTGATGAT
GCCATCAACTACTTTCATGAAAGTTTGCCTATTCTCGATGAAAGTATGTCTGGCAAGGAA
AAAACAATAGAGATCGGTGTTGAACTCTGA

InterProScan

SMART	TPR_repeat (IPR019734) - T[388-421] 41.0 - T[464-497] 5.9 - T[508-541] 71.0 - T[593-626] 92.0 - T[642-675] 52.0
SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[391-538] 4.17E-8 - T[547-671] 1.26E-9
Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[544-679] 5.1E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value