- Transcript 'KH2012:KH.C11.21.v1....' >
- Transcript 'KH2012:KH.C11.328.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S366.g07862.01.t
Possible name(s)
TTC28
Gene model
Location
S366 [4,792 / 9,083]
Amino acid sequence
Length: 1,288
>Phmamm.CG.MTP2014.S366.g07862.01.p
MSTNSDDSIEELDIEDLCEQLKEECNCLGRERNPQKSAGTLHELAKLYRQQAKECGDKYD
EIISLIRSAVLFNAAIVRKPDNVVEIERDLKILCSCVIKMAKAQNTEANLVEKAKQIFKK
VDVMRKSVLNALEKMPSLQKQATPEGDKIAQSEHTESIKKLQLDIADQYKGIMGDIMDYC
VSVMGNPPCEYALVGMGSLARKEITPYSDFENIIIGGGDPSLQKQATPEGDKIAQLEHTE
SIKKLQLDIADQYKDIMGDVMDYCVSVMGNPSCKYALVGMGSLARKEITPYSDFENIIIL
EDGIELQDNYKEILEYFRWVAVIFQLRGGGVIFQLIIVNFGETIIPTVSLPYINELDSDD
NDWFFDDFTKRGIAPDGMVPYACKTPLGRNTTECKPWRTELIKPVNKMLKYLNSEENFKN
GYHLADILTKTCFVFGDRKIFDDFQKRVQQKIKSRSAKIDLYYQTKQDAESYNVWDICNA
LRSQEKINFKKSVYRSTSLFVTALIRAYDIDADSTFDAIDKLPEEIEGQILRHDIKYMLA
LACEVRLKAYTSANAQVDWHPNVLPEENSNNQAKKDAASYDVWEVCNALRSQEKINFKKS
VYRSTSLFVTALIRAYDIDADSTFDAIDKLPEEIEGQIPRHDIKYMLALACEVRLKAYTS
ANAQVDWHPNVLPEENSNNQASGSTIVDLLGIDNTVKMMQTAMNLQEIALQKLGMVFEKN
DEDDHEEVKIDKKSDELLNKGFILLALNQHEKSLKCFNELKKSRRAGGGEFEKNDEDDDE
EGEIDKKSDELLNKEELCSTNKNNFASPTTNCYGHCFNGEILYHKRCYRQALLQFEKGEQ
LSEELDTDEECMRAIARCLYKLGLLNEALDCYDSILKTQRHPHVLLRAAKCCEITEALNL
REEALTILRKENTCCDRTLADLIFDISSDLMNINDKKYTRYLEDELVIRNKVLREKMDEE
EQIRIHYGIAECQSQLQQHDESKESYQTTIDLLVSNENHSNKKELSVEDHYILAQCYKQL
ERHDDAVKHFKAEINLMKERKQHWKKIVKNKKDLKNYLFSQGQEAQADEQLRQVKNLLEV
CLKDESDPELKVDLLFDLGCCYFDLQDYQKALDTFRGETFQQGYHLSGSDYEKNLSQQHK
YKRYLWVGRCLSLLKKFDEAINHFKECLNFLSELCKRKDSELGKEKTAEIHVEIGFCHLK
HYDFDQAITGFNRASNILYLHAEKHSTMFDAVFGRAKCFMAKEMHQVALEDLNNAMSIIT
HGGGDSEQQQKKKISLSVTTNKSHTSSW
Nucleotide sequence
Length: 3,867
>Phmamm.CG.MTP2014.S366.g07862.01.t
ATGTCAACCAATTCGGATGACAGTATTGAAGAACTGGATATTGAAGACCTATGTGAACAA
TTAAAAGAAGAATGCAACTGCCTCGGAAGAGAAAGAAATCCTCAAAAAAGTGCAGGAACT
TTACATGAACTTGCAAAACTTTATAGGCAACAGGCCAAAGAATGTGGTGATAAATATGAT
GAAATAATTTCACTTATTAGAAGTGCAGTGTTGTTTAATGCAGCTATTGTAAGAAAACCT
GATAATGTTGTTGAAATTGAGAGAGATCTTAAAATACTTTGTTCTTGTGTCATTAAAATG
GCCAAAGCTCAAAATACGGAAGCAAATTTGGTTGAAAAAGCAAAACAAATATTTAAAAAA
GTTGATGTTATGAGAAAATCAGTTTTGAATGCTTTGGAAAAAATGCCATCACTGCAAAAA
CAAGCAACACCAGAAGGGGATAAAATAGCACAATCGGAACACACAGAAAGCATAAAAAAG
CTCCAACTTGACATAGCTGATCAATACAAAGGCATCATGGGTGACATAATGGACTATTGT
GTATCTGTTATGGGAAATCCTCCTTGTGAATATGCTTTAGTGGGAATGGGATCTCTTGCC
AGAAAAGAAATTACCCCCTACTCTGATTTCGAAAACATTATTATTGGGGGGGGGGATCCA
TCACTTCAAAAACAAGCAACACCCGAAGGGGATAAAATAGCACAATTGGAACACACAGAA
AGCATAAAAAAGCTCCAACTTGACATAGCTGATCAATACAAAGACATTATGGGTGATGTA
ATGGACTATTGTGTATCTGTTATGGGAAATCCTTCTTGTAAATATGCTTTAGTTGGAATG
GGATCTCTTGCCAGAAAAGAAATCACTCCCTACTCTGATTTCGAAAACATTATTATTTTA
GAAGATGGAATCGAGCTGCAAGATAACTATAAAGAGATACTTGAGTACTTTAGATGGGTT
GCTGTCATATTTCAGCTGAGGGGGGGGGGTGTCATATTTCAGTTGATAATTGTAAACTTT
GGAGAAACAATAATTCCAACAGTTTCTCTGCCTTATATTAATGAGCTGGATTCAGATGAC
AATGACTGGTTTTTTGATGATTTTACTAAACGGGGAATAGCGCCTGATGGAATGGTTCCA
TATGCTTGTAAAACACCCTTGGGAAGAAACACAACTGAATGCAAACCCTGGAGAACAGAA
TTAATTAAACCTGTGAACAAAATGCTTAAATATCTCAACAGTGAAGAAAACTTTAAAAAT
GGATATCATCTTGCTGATATTCTCACAAAAACTTGCTTTGTGTTTGGGGATAGAAAAATA
TTTGATGATTTTCAAAAAAGAGTACAACAAAAAATAAAATCGCGTAGCGCTAAAATAGAT
TTGTATTATCAAACAAAACAAGATGCTGAATCTTATAATGTATGGGATATTTGCAATGCA
CTTCGCAGTCAGGAAAAAATAAATTTCAAGAAATCAGTTTATCGAAGCACAAGTTTATTT
GTTACTGCATTAATCAGAGCTTATGACATTGACGCTGATTCGACCTTCGATGCAATTGAT
AAACTTCCTGAAGAAATAGAAGGACAAATCCTAAGGCATGACATCAAATACATGCTTGCA
TTGGCATGTGAAGTTAGATTGAAAGCTTACACATCAGCAAATGCCCAGGTTGATTGGCAT
CCTAATGTTTTGCCCGAAGAAAACAGTAACAACCAAGCAAAAAAAGATGCTGCATCTTAC
GATGTATGGGAGGTATGTAATGCACTTCGCAGTCAGGAAAAAATAAATTTCAAGAAATCA
GTTTATCGAAGCACAAGTTTATTTGTTACTGCCTTAATCCGAGCTTATGACATTGACGCT
GATTCGACCTTCGATGCAATTGATAAACTTCCTGAAGAAATAGAAGGACAAATTCCAAGG
CATGATATCAAATACATGCTTGCACTGGCATGTGAAGTTAGATTAAAAGCCTACACATCA
GCAAATGCCCAGGTTGATTGGCATCCTAATGTTTTGCCAGAAGAAAACAGTAACAATCAA
GCAAGTGGTTCAACCATTGTTGATTTACTTGGCATAGATAACACAGTCAAAATGATGCAA
ACTGCCATGAATCTGCAGGAAATTGCTTTGCAAAAACTAGGCATGGTGTTTGAAAAAAAT
GATGAAGATGATCATGAAGAGGTGAAAATTGACAAGAAGTCGGATGAGTTGCTGAATAAA
GGCTTTATTTTGCTAGCATTAAATCAACATGAAAAATCTCTGAAATGTTTTAATGAACTT
AAAAAATCTAGAAGAGCTGGGGGGGGGGAGTTTGAAAAAAATGATGAAGATGATGATGAA
GAAGGGGAAATTGACAAGAAGTCCGATGAGTTGCTGAATAAAGAAGAGCTTTGTTCAACA
AATAAAAACAACTTTGCTTCGCCAACAACAAATTGTTACGGGCATTGTTTCAATGGTGAA
ATTCTTTATCACAAGCGATGCTACAGACAAGCATTGCTACAGTTTGAAAAAGGTGAACAA
CTTTCAGAGGAATTGGATACTGATGAAGAATGTATGAGAGCAATAGCCAGATGCCTTTAC
AAACTTGGGTTGCTGAACGAGGCACTGGATTGCTATGATTCAATACTTAAAACTCAGAGG
CATCCCCATGTTTTGCTTAGAGCTGCGAAATGCTGTGAAATAACAGAGGCATTAAATTTG
AGAGAAGAGGCATTGACGATTTTAAGAAAAGAAAATACATGCTGTGATAGGACTTTAGCA
GATTTAATTTTTGACATTTCATCAGATTTAATGAACATAAATGACAAGAAATATACACGC
TATCTTGAAGATGAGCTGGTTATTAGAAATAAAGTATTAAGGGAGAAAATGGATGAAGAA
GAACAAATTCGCATTCATTATGGAATAGCAGAATGTCAAAGTCAGCTTCAACAACATGAT
GAGTCAAAAGAAAGTTATCAAACAACAATCGACCTACTAGTGAGCAACGAAAATCATTCA
AATAAAAAGGAATTATCAGTTGAAGACCACTACATATTGGCGCAATGTTATAAGCAACTA
GAAAGACATGATGATGCTGTTAAACATTTCAAAGCTGAAATAAACCTGATGAAAGAAAGA
AAACAACACTGGAAAAAAATAGTAAAGAATAAAAAAGATTTAAAAAACTACTTATTTTCA
CAAGGACAAGAAGCACAAGCAGATGAACAGTTACGGCAGGTTAAAAACTTGTTGGAAGTC
TGTTTGAAAGATGAGTCTGACCCTGAGCTAAAAGTTGATTTGTTGTTTGACCTTGGTTGT
TGTTATTTTGACCTTCAAGATTATCAAAAAGCCCTGGATACATTTCGGGGAGAAACATTT
CAACAGGGATATCATCTTTCTGGGTCAGATTATGAAAAAAATTTGTCACAGCAGCATAAA
TATAAACGTTATCTTTGGGTTGGCCGATGCCTTTCCTTATTAAAAAAGTTTGATGAAGCT
ATTAACCACTTTAAGGAATGTCTTAACTTTCTTAGTGAACTTTGTAAAAGAAAAGATAGT
GAACTTGGTAAAGAGAAAACAGCAGAAATCCATGTTGAAATTGGATTTTGCCACTTAAAG
CATTACGACTTTGACCAAGCAATAACTGGTTTCAACAGGGCTTCAAACATACTTTATTTA
CATGCTGAAAAGCATTCAACCATGTTTGATGCAGTATTTGGAAGAGCCAAGTGCTTCATG
GCCAAAGAAATGCATCAAGTTGCCTTGGAGGACCTGAACAACGCAATGAGCATAATCACA
CATGGGGGGGGGGATTCAGAGCAACAGCAGAAAAAGAAAATTTCCCTCTCAGTAACTACC
AATAAATCACATACAAGCTCTTGGTAA
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[158-218] 7.9E-6 - T[238-312] 1.0E-7 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[729-909] 1.76E-8 - T[819-1256] 9.49E-14 - T[961-1162] 4.56E-12 |
| SMART |
TPR_repeat (IPR019734) - T[734-767] 73.0 - T[812-845] 83.0 - T[849-882] 4.5 - T[963-996] 2.1 - T[1007-1040] 6.9 - T[1092-1130] 62.0 - T[1141-1174] 12.0 - T[1188-1221] 27.0 - T[1229-1262] 180.0 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[936-1117] 6.0E-14 - T[1137-1271] 3.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|