- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S365.g07860.01.t
Possible name(s)
ADGRB2; FCGBP; HMCN1
Gene model
Location
S365 [117,437 / 129,681]
Amino acid sequence
Length: 1,128
>Phmamm.CG.MTP2014.S365.g07860.01.p
MWFQQSITAVPTTSFTTRTSTFTIPTTAATTTSILTSPTTVFSTSYRPAPSTTRPTASTI
TATLTSRFSTMTSQFSTLTSSPTTMTSSSALPTSRPPFTYLGGPFGFYQIGNMLMYSECP
RAGNELCLDGSVTDESNCTRNYCCWNKELVGSTYDPCYRPSIRVINWPDPGKNQTELPKW
TPWTPWSSCMGQPCRVGIRTRERTCENKTPALACTGVGADVEQCESPCPKTWGPWTAWSG
CDVKCGPGITTRRRSCVDDGGSIVSNTGCPQGSFAARESLPCQTDFCTTWSPWITGPCSS
SCGRGIRNNTRICFGESSRKSPTSCYYVTALCDDVPCPLPTPSNPEWGPWTPWSRCSEPC
GTGTRSRIRMCYDSVNGEPVSTGSKPYCDNGPGFQVDGCNTGCPSGDAVACIDRYCNNEC
PAYPDAFCYKRGCDGDCNSVEFFIGGTKLDLDMCEETCAGKWTPWLDRDNPGGVGDFETL
LELRKERPEVICDRPSLIQAQTLAGVPAALTGQVTYKSLTDGFKCINNDNKGQCFDYRVR
FCCEDIPQCPDKAWTQFFNRDRPSLTCDCETLSDLRREYPDKICDKPTAIDVRVAATNEP
YTTAGQVIAHADPERGFRCNNIRQQCLDYKVRFCCPEVPPPTCEKDGWTPWLNVDDPTGD
CDCENTIPEPECKNGKWTQFYNRDRPSGEGDYEILSELLELTPEDICHNPTNVDVQVVAT
GASYLTAGQNVVIDPQTGFYCVNDHQNGEFCKDYQIRFCCPNECDEPKCTDGDWTQFYDI
DDADGDCDCELIDDINAVSKKKVCLNPTAIDARLLNGDDYTTANQDVHISLDDGFACYNS
EDQKCCDYKVRFCCPKREVQCIDGQWTQFFDLDDSAGANMGDVEMFSNVNLTCHPTNMDI
TLLNGAPYETTGETVHIAFPINFKCVDAEQDDRSCEDYQVRYCCSENEPEAVIKHWCTAW
GDPHYTTLDGRAYDFQGNCLYNFVSTISPEWKMRVPRFSVWTENRPCGAFTTCIRTVHIR
YFNMEITFLPGGAVEINGNGVSLPYSDPFYPFEIVTLPNVQVAFLAEFIRVLFDGRYSLK
VGLNDVYMKHVDGLCANFNGDQTDEFTVNGAITTNINEFGESHALEPE
Nucleotide sequence
Length: 3,387
>Phmamm.CG.MTP2014.S365.g07860.01.t
ATGTGGTTTCAACAATCTATCACAGCGGTACCAACTACATCATTCACCACACGTACGAGC
ACGTTTACAATCCCAACAACAGCAGCAACTACAACTTCAATCCTGACGTCACCAACAACA
GTTTTCTCAACATCGTATCGTCCTGCACCTTCGACGACAAGGCCAACAGCAAGCACCATC
ACCGCGACACTTACGTCACGATTTTCCACAATGACCTCTCAGTTTTCCACTTTGACGTCA
TCGCCAACCACTATGACGTCATCTTCAGCGTTGCCTACGTCACGACCACCATTTACGTAT
CTCGGCGGTCCGTTTGGATTCTATCAGATTGGGAATATGCTGATGTATTCTGAATGTCCG
AGGGCAGGCAACGAGTTATGTTTGGACGGTTCTGTCACGGATGAGTCTAATTGCACACGG
AACTACTGCTGCTGGAACAAGGAGCTTGTCGGCAGCACTTACGACCCCTGCTACAGACCT
TCTATTCGCGTTATTAACTGGCCTGATCCTGGAAAGAACCAAACTGAGCTGCCAAAATGG
ACGCCATGGACCCCGTGGTCGAGTTGCATGGGTCAGCCTTGTCGTGTTGGAATACGAACG
CGGGAACGGACCTGTGAGAATAAAACACCAGCATTAGCTTGTACAGGAGTGGGAGCAGAC
GTCGAACAGTGTGAATCTCCATGTCCGAAAACGTGGGGTCCATGGACAGCATGGTCGGGT
TGCGATGTAAAATGCGGACCTGGTATCACAACAAGGCGACGTTCGTGTGTAGATGACGGA
GGAAGTATTGTTTCCAACACCGGTTGTCCACAGGGTAGCTTTGCTGCAAGAGAATCCCTT
CCATGTCAGACCGACTTTTGCACGACTTGGTCCCCGTGGATTACAGGCCCATGCTCAAGT
TCATGCGGCAGAGGCATCAGAAACAACACGAGAATATGTTTTGGTGAATCGTCGCGAAAA
TCTCCAACTAGTTGTTATTACGTCACTGCTTTGTGCGATGACGTGCCATGTCCTCTACCC
ACTCCCTCAAATCCCGAGTGGGGTCCGTGGACACCGTGGAGTCGGTGTTCTGAACCTTGT
GGAACCGGTACCCGATCTAGAATCAGAATGTGTTATGATAGCGTCAATGGGGAACCGGTT
TCAACTGGTTCGAAGCCATATTGTGACAATGGGCCCGGATTTCAAGTAGATGGATGTAAT
ACAGGTTGTCCGTCCGGCGATGCTGTAGCATGTATAGACAGATACTGCAACAACGAATGC
CCGGCTTATCCTGATGCATTCTGTTACAAAAGAGGCTGTGATGGCGACTGTAATTCGGTT
GAATTTTTCATCGGTGGAACCAAACTTGATCTTGACATGTGCGAAGAAACCTGTGCTGGA
AAGTGGACGCCATGGTTAGACCGTGACAACCCTGGTGGTGTTGGAGATTTTGAAACTCTA
TTGGAACTTCGTAAAGAGAGACCTGAGGTCATTTGTGATCGACCTTCTCTGATCCAAGCA
CAAACTCTTGCCGGGGTTCCAGCAGCTCTTACTGGCCAAGTTACCTACAAATCTCTGACA
GACGGATTTAAGTGCATAAATAATGACAACAAAGGACAATGCTTTGACTACAGGGTTCGC
TTTTGCTGCGAAGACATTCCCCAATGCCCAGACAAAGCATGGACACAATTTTTCAACCGT
GATCGCCCATCATTAACTTGTGATTGTGAAACCCTAAGCGATTTAAGAAGGGAATATCCT
GATAAAATATGTGACAAACCAACAGCAATTGATGTAAGGGTAGCAGCAACGAATGAGCCC
TATACCACAGCGGGCCAAGTTATAGCACATGCTGATCCAGAAAGGGGCTTTCGCTGCAAC
AATATTAGGCAGCAATGCTTGGATTATAAGGTCCGATTTTGCTGCCCAGAGGTACCACCA
CCAACATGTGAAAAGGATGGATGGACACCTTGGCTCAATGTTGATGACCCCACTGGTGAT
TGCGATTGTGAAAACACCATTCCGGAACCCGAATGTAAAAATGGAAAATGGACCCAATTT
TACAATCGTGATCGTCCTAGTGGGGAAGGAGATTATGAGATTCTATCCGAACTATTGGAG
TTGACACCAGAGGACATTTGCCATAATCCCACCAACGTAGATGTCCAAGTGGTCGCCACA
GGGGCCAGTTACTTGACCGCTGGGCAAAATGTGGTAATTGATCCACAAACAGGCTTCTAC
TGTGTAAATGATCACCAAAATGGCGAATTTTGCAAAGATTATCAGATTCGATTTTGCTGT
CCAAATGAATGTGACGAGCCCAAATGCACTGACGGTGATTGGACGCAGTTCTACGACATT
GATGACGCAGATGGAGATTGTGACTGTGAACTTATTGATGACATTAACGCCGTTTCAAAG
AAAAAAGTTTGTCTCAATCCAACGGCTATAGATGCCCGCTTGTTAAACGGTGATGATTAC
ACTACAGCAAATCAGGACGTTCATATTAGCTTGGATGATGGCTTCGCTTGCTACAACAGC
GAAGACCAGAAATGTTGCGACTATAAAGTCAGATTTTGCTGCCCTAAACGTGAGGTGCAG
TGCATTGACGGACAATGGACACAGTTCTTTGACTTGGACGACTCGGCTGGTGCCAACATG
GGAGACGTCGAAATGTTTAGCAATGTAAATCTAACTTGTCATCCCACTAACATGGACATC
ACGTTGCTCAATGGCGCCCCCTATGAGACGACTGGCGAAACGGTTCACATAGCATTTCCA
ATCAACTTCAAATGTGTGGATGCCGAACAGGACGATAGATCGTGTGAGGACTATCAAGTC
CGTTATTGCTGCTCAGAAAATGAGCCAGAAGCGGTAATAAAGCACTGGTGCACGGCTTGG
GGAGATCCCCACTACACCACACTTGATGGACGGGCTTACGACTTCCAAGGGAACTGTCTG
TACAATTTCGTTTCCACTATTTCACCAGAGTGGAAAATGCGCGTGCCCCGATTTTCTGTA
TGGACTGAAAACAGACCGTGTGGTGCTTTTACGACGTGTATACGAACTGTCCATATTCGC
TACTTTAACATGGAAATTACATTTCTTCCAGGGGGTGCAGTTGAGATTAATGGAAATGGG
GTATCATTGCCCTACAGCGACCCATTTTATCCATTCGAAATCGTAACTCTTCCAAATGTC
CAAGTCGCATTTTTAGCCGAATTCATTCGAGTATTGTTTGATGGTCGGTACTCACTGAAG
GTTGGCCTCAACGATGTTTACATGAAACACGTCGATGGTCTTTGTGCCAACTTTAACGGG
GACCAGACTGATGAATTTACTGTGAACGGCGCCATTACCACTAACATCAACGAATTTGGT
GAAAGCCATGCCTTAGAACCAGAGTAA
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[177-229] 10.019 - T[230-288] 9.552 - T[344-404] 11.152 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[178-228] 3.6E-7 - T[230-288] 1.8E-7 - T[332-395] 1.9E-8 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[179-224] 2.09E-5 - T[227-287] 2.62E-8 - T[341-401] 4.05E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[180-229] 3.3E-7 - T[232-285] 2.3E-5 - T[287-338] 0.58 - T[347-404] 1.8E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[182-227] 1.0E-4 - T[233-259] 1.9E-5 - T[289-337] 0.026 - T[348-374] 1.6E-6 |
| Pfam |
WxxW_domain (IPR025155) - T[462-543] 2.3E-17 - T[554-635] 1.9E-16 - T[648-666] 35.0 - T[677-760] 3.9E-18 - T[774-854] 3.8E-12 - T[866-944] 4.8E-10 |
| SMART |
VWF_type-D (IPR001846) - T[942-1110] 2.5E-27 |
| ProSiteProfiles |
VWF_type-D (IPR001846) - T[956-1128] 32.425 |
| Pfam |
VWF_type-D (IPR001846) - T[957-1107] 1.2E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCGBP_HUMAN | 34.409 % | 84 | 4.17E-16 |
| HMCN1_HUMAN | 33.333 % | 97.4 | 3.13E-20 |
| AGRB2_HUMAN | 30.769 % | 98.6 | 1.11E-20 |
