Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.L11.3.v1.A...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3582.g17855.01.t

Possible name(s)

Phmamm.CG.MTP2014.S3582.g17855

Gene model

Phmamm.CG.MTP2014.S3582.g17855

Location

S3582 [4,559 / 7,547]

Sequences

Amino acid sequence

Length: 995

>Phmamm.CG.MTP2014.S3582.g17855.01.p
MITCKQVKETNSEKELASMLRRQCLSNGKEIDPKESAKTLHQLGLVYKEKSPDKISLIQS
VALMTSAVLRQPENADDIKKDLDDVCLHILTLANASKLDTTLVDIAIVEAQQKIALLRET
VKKELEIIKPISDDLKGNEMEQARKSRVAKIRKIQDYVTETYTSIMQLIANHTLFILGKA
PCKFALVGMGSLAKKEVTPYSDFESIIVLEDKIQKNPNYQNILEYFQWFSTVFQVILVRL
GETILKFLAIPCLNNPLNKEEDWFYDAYTTCGICPDGFAPQASKNPLGRQTKTQNKPWTT
ELIKPVSEMVKYLETEEDLKNGYHLADMLTKTSFVAGNFCIYKKFCAKVKNKLSKWPKFN
EHVRQKIVKDFEKYSLAHADTEHHVDLKRFVYRSCSLFVHAVGYLHETTASNSFDIMDEM
LDRGTGVITETLHSKVQSSLAVACEIRLRMYSSALSQEDILYQNTYCAMPSCMNELTTCI
GARTVVDCLNIARQLQLYVISCFTNSQFFQLSLIKEVPLNAVNIAKSVKLYAFAVRFIDE
IRKLPEHQNVLSQFDLLVSYADCLRGNGEFNRCVKVINANLKILRKNGLMIGSVLLWLIQ
ARCLIELKKYKQALKCYRKVNFFTFFKIVPFPVYIGQQVYIGMGDCFKKLWRNKKAFKYL
KLAYDHVKDYPTKGKVSDEYFEVLQHYGVCLHRLTMHEESKTVYQNLIEARLQHYVDEES
DLILNMAYFWVALNLVCLERYKEGLNTLEKAWKCVQNISEEINVKGYSNYIRAKACCLAK
LDRGLEAIDLLMSYLTSNKVSTCFFTRQNLWKDLMKVFEQCGLYDGCIMCIKEPLEYYAQ
LKQTKSVRNMVKQYQQKMKEFEDKINNYPKCIDKDAKQNLKNDFEVRIIHLSELAESSLK
HEKLDEAMAYFREIETLLPKVEENSVSLLNQEYVEFHSMVYCEISFNLIRDGQHQEAIRN
SKKAFNLPFQNCRSFNDGSINATVNLVECFXLCKS

Nucleotide sequence

Length: 2,988

>Phmamm.CG.MTP2014.S3582.g17855.01.t
ATGATTACCTGTAAACAAGTAAAAGAAACAAATTCTGAAAAAGAACTTGCAAGTATGCTA
AGGAGACAGTGTTTGTCAAATGGCAAAGAAATTGACCCAAAAGAATCTGCAAAAACTTTG
CATCAGTTGGGACTTGTGTACAAAGAGAAAAGTCCAGACAAGATCAGTCTCATTCAAAGT
GTTGCTTTAATGACATCAGCTGTGTTAAGGCAACCTGAAAATGCAGATGACATTAAGAAA
GACCTTGATGATGTATGTTTGCATATTTTAACTTTGGCAAATGCCTCAAAGTTGGATACC
ACACTGGTAGACATTGCAATTGTGGAAGCGCAGCAAAAAATTGCATTGCTCCGTGAAACA
GTAAAAAAAGAACTGGAAATAATAAAACCAATAAGTGATGACCTCAAGGGAAATGAAATG
GAACAGGCAAGGAAATCTAGGGTTGCAAAAATAAGGAAAATACAGGATTATGTTACTGAA
ACTTACACAAGTATCATGCAACTTATTGCAAATCATACACTCTTCATCCTGGGGAAAGCA
CCTTGTAAGTTTGCTTTAGTAGGAATGGGTTCATTGGCTAAAAAAGAAGTTACCCCATAT
TCTGATTTTGAAAGCATTATTGTGTTGGAAGACAAAATACAGAAAAACCCCAACTACCAA
AACATCTTAGAGTATTTTCAGTGGTTTTCAACTGTTTTTCAAGTTATACTGGTTCGTCTG
GGAGAAACTATACTCAAATTCTTGGCTATTCCATGTCTTAACAATCCCTTAAATAAAGAA
GAGGATTGGTTTTATGATGCATACACTACTTGTGGAATTTGTCCAGATGGATTTGCTCCT
CAAGCAAGTAAGAATCCATTGGGAAGACAAACAAAGACACAGAATAAGCCATGGACAACT
GAGCTTATCAAACCAGTCAGTGAGATGGTGAAGTACTTGGAAACAGAAGAGGATTTGAAA
AATGGATATCATTTGGCAGATATGTTGACTAAAACCAGTTTTGTGGCAGGGAATTTTTGT
ATTTACAAAAAATTCTGTGCAAAAGTTAAAAACAAATTAAGTAAGTGGCCAAAGTTTAAT
GAACATGTAAGGCAGAAAATAGTAAAGGATTTTGAAAAATATTCCCTTGCACATGCAGAC
ACAGAACACCATGTGGATCTAAAACGCTTTGTATATAGAAGTTGCTCCTTATTTGTGCAT
GCTGTTGGCTATTTGCATGAAACTACAGCTTCAAACAGCTTTGATATAATGGATGAAATG
CTTGACCGTGGAACAGGTGTCATTACTGAGACACTACACAGCAAAGTACAATCTTCCTTA
GCTGTTGCATGTGAAATTCGGTTGAGAATGTACAGCAGTGCGTTAAGTCAAGAAGACATT
CTTTATCAGAACACGTATTGTGCGATGCCATCCTGTATGAATGAGTTGACAACATGTATT
GGAGCCCGCACAGTAGTTGATTGTCTGAATATTGCACGACAGTTACAACTGTATGTTATC
AGCTGCTTTACAAACAGCCAATTTTTTCAGTTAAGTTTGATTAAAGAGGTACCATTGAAT
GCAGTAAACATTGCCAAGTCTGTAAAGTTGTATGCTTTTGCTGTGAGATTCATTGATGAA
ATTCGCAAGCTACCAGAACATCAAAATGTTCTTTCCCAATTTGATTTGCTTGTTTCCTAT
GCAGATTGCCTTCGGGGGAATGGAGAATTCAATAGATGTGTAAAAGTTATAAATGCAAAC
CTAAAAATTTTGCGGAAAAATGGATTGATGATAGGTTCAGTTTTACTTTGGTTAATACAG
GCTCGCTGTTTGATTGAATTGAAAAAGTACAAACAAGCTCTAAAATGCTACAGAAAAGTA
AACTTTTTCACTTTTTTTAAAATAGTACCCTTTCCTGTTTATATTGGACAACAAGTTTAT
ATTGGAATGGGAGACTGTTTCAAAAAACTTTGGCGCAACAAAAAGGCTTTTAAATACCTA
AAACTTGCATATGATCATGTTAAAGATTATCCTACAAAAGGTAAAGTTAGTGATGAGTAT
TTTGAAGTTTTGCAACATTACGGAGTTTGCCTACACCGCTTGACAATGCATGAAGAATCA
AAAACAGTTTATCAAAACTTGATTGAAGCACGACTCCAACATTATGTGGATGAAGAGTCA
GATCTTATACTTAACATGGCATATTTTTGGGTTGCTTTAAATTTAGTTTGTCTGGAAAGG
TATAAAGAGGGTCTCAATACACTTGAAAAGGCTTGGAAATGTGTGCAAAACATCAGTGAA
GAAATTAATGTTAAAGGTTACAGCAACTATATTCGCGCAAAAGCTTGTTGCCTGGCTAAA
CTAGATAGAGGTTTGGAAGCAATAGATTTGTTGATGTCATATCTAACAAGCAATAAAGTG
TCAACATGTTTTTTTACCAGACAGAATTTGTGGAAAGATTTAATGAAAGTCTTTGAGCAA
TGTGGATTGTATGATGGCTGCATAATGTGTATCAAAGAACCATTAGAATATTATGCACAG
CTTAAGCAAACTAAATCTGTTCGTAATATGGTCAAACAATACCAGCAGAAAATGAAAGAG
TTTGAAGACAAAATAAACAACTACCCCAAATGTATAGATAAAGATGCAAAACAAAATTTA
AAAAACGACTTTGAAGTAAGGATAATCCATCTAAGCGAGCTTGCTGAAAGCTCACTTAAA
CATGAAAAACTTGATGAAGCTATGGCTTATTTTAGAGAGATAGAAACGCTCCTTCCAAAA
GTTGAAGAAAACTCTGTATCTCTGTTAAATCAAGAATATGTCGAGTTTCACAGTATGGTT
TATTGTGAAATTTCTTTTAATCTTATTCGGGATGGGCAACACCAAGAAGCAATAAGGAAC
TCCAAGAAAGCGTTCAATTTGCCATTTCAAAATTGTAGAAGCTTTAATGATGGAAGCATC
AATGCAACAGTTAATCTTGTTGAATGTTTTNTTCTGTGCAAAAGTTAA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[147-241] 6.3E-7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[519-968] 1.7E-21
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[555-710] 2.66E-10 - T[639-875] 2.9E-8 - T[882-986] 4.36E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value